Variant report

Variant	rs373053746
Chromosome Location	chr5:119378886-119378887
allele	-/CAA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:33 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024455	chr5:118770429-119487982	Strong transcription Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1016271	chr5:118836891-119487982	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv882778	chr5:118972113-119384039	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv599568	chr5:119199265-119414589	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv1023146	chr5:119301891-119623417	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv537883	chr5:119301891-119623417	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	esv3331559	chr5:119306944-119536554	Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	nsv532200	chr5:119317901-120102513	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
9	nsv882780	chr5:119332670-119488924	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
10	esv3442578	chr5:119355102-119378953	Enhancers Weak transcription Flanking Active TSS	lncRNA	n/a	inside rSNPs	n/a
11	esv1827579	chr5:119356669-119435037	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
12	esv1827829	chr5:119356669-119435037	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
13	esv1846556	chr5:119356669-119435037	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
14	esv1849212	chr5:119356669-119435037	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
15	nsv882781	chr5:119369334-119557828	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
16	esv1809705	chr5:119372212-119382693	Enhancers Weak transcription Flanking Active TSS	lncRNA	n/a	inside rSNPs	n/a
17	esv1827670	chr5:119372212-119382693	Flanking Active TSS Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	n/a
18	esv18252	chr5:119377904-119382657	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
19	esv3468526	chr5:119378153-119384651	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
20	nsv599569	chr5:119378643-119382040	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
21	nsv599570	chr5:119378643-119382635	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
22	esv1826653	chr5:119378643-119382693	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
23	esv1827344	chr5:119378643-119382693	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
24	nsv599571	chr5:119378643-119382693	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
25	esv1807500	chr5:119378643-119383902	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
26	esv1820607	chr5:119378643-119383902	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
27	esv1833637	chr5:119378643-119383902	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
28	esv1841936	chr5:119378643-119383902	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
29	esv3496321	chr5:119378703-119386251	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
30	esv3496320	chr5:119378853-119385901	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
31	esv3496322	chr5:119378853-119385901	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
32	esv1204853	chr5:119378885-119378890	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
33	esv2217251	chr5:119378886-119378890	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:119376000-119379200	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr5:119378600-119379600	Enhancers	Monocytes-CD14+_RO01746	blood

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