Variant report

Variant rs3734563
Chromosome Location chr6:28349725-28349726
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28318400-28350800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:28324400-28357200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr6:28324400-28357600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:28324600-28358600 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr6:28325400-28350800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr6:28332000-28350600 Weak transcription Psoas Muscle Psoas
7 chr6:28333800-28349800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr6:28333800-28349800 Weak transcription Pancreas Pancrea
9 chr6:28333800-28350800 Weak transcription Lung lung
10 chr6:28333800-28351000 Weak transcription Placenta Amnion Placenta Amnion
11 chr6:28334000-28350000 Weak transcription Rectal Smooth Muscle rectum
12 chr6:28334000-28350600 Weak transcription Colonic Mucosa Colon
13 chr6:28334000-28350800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr6:28334200-28349800 Weak transcription Aorta Aorta
15 chr6:28334200-28351000 Weak transcription Gastric stomach
16 chr6:28334200-28351200 Weak transcription Spleen Spleen
17 chr6:28334400-28350600 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr6:28334400-28351000 Weak transcription Esophagus oesophagus
19 chr6:28334600-28351000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr6:28344800-28350800 Weak transcription Small Intestine intestine
21 chr6:28345000-28350200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr6:28345000-28361600 Strong transcription Dnd41 blood
23 chr6:28345200-28350200 Weak transcription Hela-S3 cervix
24 chr6:28345600-28350000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr6:28345600-28350000 Strong transcription Fetal Intestine Large intestine
26 chr6:28345600-28350000 Strong transcription NH-A brain
27 chr6:28345600-28350200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:28345600-28350200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:28345600-28350200 Strong transcription Fetal Muscle Trunk muscle
30 chr6:28345600-28350200 Strong transcription Fetal Thymus thymus
31 chr6:28345600-28350600 Strong transcription Brain Germinal Matrix brain
32 chr6:28345800-28350400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr6:28346000-28350000 Strong transcription HMEC breast
34 chr6:28346000-28350200 ZNF genes & repeats K562 blood
35 chr6:28346000-28350400 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr6:28346200-28350000 Weak transcription Fetal Intestine Small intestine
37 chr6:28346200-28350200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr6:28346200-28350600 Weak transcription Fetal Stomach stomach
39 chr6:28346600-28350000 Strong transcription Primary hematopoietic stem cells blood
40 chr6:28346800-28350000 Strong transcription Primary B cells from peripheral blood blood
41 chr6:28346800-28350200 Strong transcription Fetal Lung lung
42 chr6:28346800-28350400 Strong transcription iPS-18 Cell Line embryonic stem cell
43 chr6:28346800-28350400 Strong transcription Fetal Kidney kidney
44 chr6:28347000-28350000 Strong transcription iPS-20b Cell Line embryonic stem cell
45 chr6:28347200-28350200 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr6:28347200-28350200 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr6:28347200-28350200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr6:28347200-28350200 Strong transcription Fetal Muscle Leg muscle
49 chr6:28347200-28350400 Strong transcription HUES48 Cell Line embryonic stem cell
50 chr6:28347200-28350400 Strong transcription Cortex derived primary cultured neurospheres brain

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