Variant report
| Variant | rs373904808 |
|---|---|
| Chromosome Location | chr4:98184657-98184658 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | lncRNA name | Chromosome Location | lncRNA alias |
|---|---|---|---|
| 1 | lnc-TSPAN5-3 | chr4:98184599-98184732 | NONHSAT097477 |
| No data |
| No data |
| No data |
Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv879640 | chr4:97711707-98697586 | Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
| 2 | nsv822656 | chr4:98172266-98187338 | Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| 3 | esv3467260 | chr4:98172364-98187503 | Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| 4 | esv2421442 | chr4:98172414-98185132 | Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| 5 | nsv442913 | chr4:98172414-98185132 | Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| 6 | esv3467259 | chr4:98172417-98187482 | Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| 7 | esv3467261 | chr4:98172417-98187482 | Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| 8 | nsv822657 | chr4:98172476-98187201 | Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| 9 | nsv822658 | chr4:98172476-98187338 | Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| 10 | nsv822659 | chr4:98172603-98187338 | Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
