Variant report

Variant	rs3754930
Chromosome Location	chr2:182926144-182926145
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10497590	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs16822401	0.92[CHB][hapmap];0.92[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs16822409	0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs16822412	0.86[ASN][1000 genomes]
rs16822697	1.00[LWK][hapmap];1.00[MKK][hapmap];0.83[AFR][1000 genomes]
rs17647806	1.00[LWK][hapmap]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:182903200-182928400	Weak transcription	Left Ventricle	heart
2	chr2:182918400-182928400	Weak transcription	Fetal Thymus	thymus
3	chr2:182918800-182937400	Weak transcription	Thymus	Thymus
4	chr2:182921200-182928800	Weak transcription	Fetal Heart	heart
5	chr2:182925600-182926400	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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