Variant report

Variant rs375891873
Chromosome Location chr6:35286358-35286359
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35276000-35293800 Weak transcription K562 blood
2 chr6:35280800-35293200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr6:35281600-35291600 Strong transcription Primary B cells from peripheral blood blood
4 chr6:35282000-35293400 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr6:35282000-35293600 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr6:35282000-35293800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr6:35282200-35293600 Strong transcription Primary monocytes fromperipheralblood blood
8 chr6:35282600-35293600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr6:35282800-35293600 Strong transcription Primary hematopoietic stem cells short term culture blood
10 chr6:35283400-35293400 Strong transcription Primary B cells from cord blood blood
11 chr6:35283800-35293400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
12 chr6:35284000-35291600 Strong transcription Dnd41 blood
13 chr6:35284000-35293000 Strong transcription Primary T cells from cord blood blood
14 chr6:35284000-35293400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
15 chr6:35284200-35290800 Strong transcription GM12878-XiMat blood
16 chr6:35284200-35293400 Strong transcription Primary T helper naive cells from peripheral blood blood
17 chr6:35284400-35292800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr6:35284400-35293600 Strong transcription Primary T regulatory cells fromperipheralblood blood
19 chr6:35284800-35290600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr6:35285200-35286600 Active TSS Brain Anterior Caudate brain
21 chr6:35285200-35286800 Active TSS Duodenum Smooth Muscle Duodenum
22 chr6:35285200-35286800 Active TSS A549 lung
23 chr6:35285200-35290800 Strong transcription Primary T killer memory cells from peripheral blood blood
24 chr6:35285200-35292800 Strong transcription Thymus Thymus
25 chr6:35285400-35286600 Active TSS Brain Angular Gyrus brain
26 chr6:35285400-35286600 Active TSS Brain Hippocampus Middle brain
27 chr6:35285400-35286600 Active TSS Colon Smooth Muscle Colon
28 chr6:35285400-35286800 Genic enhancers Primary T cells fromperipheralblood blood
29 chr6:35285400-35286800 Genic enhancers Primary T helper cells fromperipheralblood blood
30 chr6:35285400-35286800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:35285400-35286800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
32 chr6:35285400-35289200 Strong transcription Primary T helper naive cells fromperipheralblood blood
33 chr6:35285400-35289800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr6:35285400-35293400 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr6:35285600-35286400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
36 chr6:35285600-35286400 Active TSS Osteobl bone
37 chr6:35285600-35286600 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr6:35285600-35286600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr6:35285600-35286600 Bivalent Enhancer Fetal Brain Male brain
40 chr6:35285600-35286600 Active TSS Psoas Muscle Psoas
41 chr6:35285600-35286800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
42 chr6:35285600-35286800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr6:35285600-35286800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
44 chr6:35285600-35286800 Flanking Active TSS Adipose Nuclei Adipose
45 chr6:35285600-35286800 Flanking Active TSS Colonic Mucosa Colon
46 chr6:35285600-35286800 Active TSS Pancreatic Islets Pancreatic Islet
47 chr6:35285600-35286800 Flanking Active TSS Pancreas Pancrea
48 chr6:35285600-35287000 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
49 chr6:35285600-35291400 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr6:35285800-35286400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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