Variant report

Variant	rs378391
Chromosome Location	chr14:65306218-65306219
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:65305044..65306724-chr14:65335578..65337620,2	K562	blood:
2	chr14:65301182..65304259-chr14:65304528..65307494,3	K562	blood:
3	chr14:65306058..65308869-chr14:65317790..65319964,2	MCF-7	breast:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1003370	0.91[EUR][1000 genomes]
rs10151551	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs10162522	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs1033785	0.85[ASN][1000 genomes]
rs1122339	0.91[EUR][1000 genomes]
rs12147448	1.00[CEU][hapmap]
rs1475101	0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs1535450	0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs1957430	0.91[EUR][1000 genomes]
rs1957433	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs2104170	1.00[CEU][hapmap]
rs230702	0.82[CHB][hapmap];0.90[JPT][hapmap];0.84[ASN][1000 genomes]
rs230721	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs230722	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs368818	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs374461	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs375797	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs3813424	0.91[EUR][1000 genomes]
rs389370	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs395112	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs397901	0.94[EUR][1000 genomes]
rs399508	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs406811	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs422574	0.82[CHB][hapmap];0.90[JPT][hapmap];0.85[ASN][1000 genomes]
rs424222	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs426044	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs435006	0.94[EUR][1000 genomes]
rs4899151	0.91[EUR][1000 genomes]
rs4902323	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs4902324	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs61989891	0.94[EUR][1000 genomes]
rs6573584	1.00[CEU][hapmap]
rs7149121	0.94[EUR][1000 genomes]
rs762072	0.94[EUR][1000 genomes]
rs8008229	0.91[EUR][1000 genomes]
rs8013371	0.86[EUR][1000 genomes]
rs8022462	1.00[CEU][hapmap]
rs9323455	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs9323456	1.00[CEU][hapmap];0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3693408	chr14:65292670-65358576	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65296400-65308600	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr14:65298000-65306800	Weak transcription	Right Atrium	heart
3	chr14:65298400-65309800	Weak transcription	Right Ventricle	heart
4	chr14:65303600-65308200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr14:65304000-65307000	Weak transcription	Fetal Muscle Leg	muscle
6	chr14:65304800-65307200	Enhancers	K562	blood
7	chr14:65305400-65306400	Enhancers	Psoas Muscle	Psoas
8	chr14:65306000-65307800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr14:65306000-65307800	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr14:65306200-65307800	Weak transcription	Aorta	Aorta

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