Variant report

Variant rs3790647
Chromosome Location chr1:214818945-214818946
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214777600-214838600 Weak transcription Esophagus oesophagus
2 chr1:214777800-214838400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:214778000-214839200 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr1:214783400-214838800 Weak transcription Fetal Kidney kidney
5 chr1:214784600-214834000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:214785600-214819400 Strong transcription K562 blood
7 chr1:214785600-214843800 Strong transcription Fetal Thymus thymus
8 chr1:214786200-214843000 Strong transcription HUES64 Cell Line embryonic stem cell
9 chr1:214786600-214833800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:214786600-214843200 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr1:214786800-214843800 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr1:214787600-214842200 Strong transcription iPS-18 Cell Line embryonic stem cell
13 chr1:214788200-214820600 Weak transcription Fetal Heart heart
14 chr1:214789000-214837400 Weak transcription Small Intestine intestine
15 chr1:214794400-214833200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:214795200-214838600 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:214801000-214839600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:214801000-214843000 Strong transcription HUES48 Cell Line embryonic stem cell
19 chr1:214801200-214846000 Strong transcription iPS-20b Cell Line embryonic stem cell
20 chr1:214801800-214841400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr1:214801800-214842600 Strong transcription A549 lung
22 chr1:214801800-214844800 Strong transcription H1 Cell Line embryonic stem cell
23 chr1:214802000-214820400 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr1:214802000-214842000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:214802400-214841600 Strong transcription Primary monocytes fromperipheralblood blood
26 chr1:214803200-214820000 Strong transcription GM12878-XiMat blood
27 chr1:214803400-214820400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:214804000-214858200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr1:214804200-214839400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:214805800-214845800 Strong transcription Dnd41 blood
31 chr1:214806000-214840200 Weak transcription Fetal Intestine Small intestine
32 chr1:214810400-214847400 Weak transcription Brain Germinal Matrix brain
33 chr1:214810800-214821600 Strong transcription HepG2 liver
34 chr1:214811000-214825400 Strong transcription HSMM muscle
35 chr1:214811200-214823400 Strong transcription NHEK skin
36 chr1:214811200-214841600 Strong transcription Primary hematopoietic stem cells short term culture blood
37 chr1:214811400-214841600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr1:214811600-214825200 Strong transcription Cortex derived primary cultured neurospheres brain
39 chr1:214811600-214833600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:214811600-214840400 Strong transcription H9 Cell Line embryonic stem cell
41 chr1:214811800-214823400 Strong transcription HMEC breast
42 chr1:214811800-214833800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:214812000-214820600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:214812000-214825400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:214812000-214840600 Strong transcription Thymus Thymus
46 chr1:214812200-214834200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:214812600-214829200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:214812800-214822000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:214812800-214846000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:214813400-214840600 Strong transcription HUVEC blood vessel

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