The 2.0 version of rSNPBase

Variant report

Variant rs17023274
Chromosome Location chr1:214787543-214787544
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214777600-214800400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:214777600-214810800 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:214777600-214838600 Weak transcription Esophagus oesophagus
4 chr1:214777800-214838400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:214778000-214839200 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:214778200-214791200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:214778200-214791200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:214778200-214793000 Weak transcription HSMM muscle
9 chr1:214778200-214793600 Weak transcription Duodenum Mucosa Duodenum
10 chr1:214778200-214793800 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr1:214778200-214803600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr1:214778400-214794200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:214778600-214788000 Weak transcription Hela-S3 cervix
14 chr1:214778600-214791200 Weak transcription NHEK skin
15 chr1:214778800-214787600 Weak transcription Muscle Satellite Cultured Cells --
16 chr1:214778800-214787800 Weak transcription HepG2 liver
17 chr1:214778800-214788800 Weak transcription HMEC breast
18 chr1:214778800-214794000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr1:214781200-214818000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:214781400-214790600 Weak transcription Fetal Muscle Trunk muscle
21 chr1:214781600-214791400 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr1:214781800-214792800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr1:214781800-214794000 Weak transcription Fetal Stomach stomach
24 chr1:214781800-214795800 Weak transcription Fetal Intestine Small intestine
25 chr1:214782000-214803800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr1:214782800-214792800 Weak transcription Thymus Thymus
27 chr1:214782800-214794000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:214783000-214788600 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr1:214783000-214788800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:214783200-214788000 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:214783200-214788400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:214783200-214788800 Weak transcription GM12878-XiMat blood
33 chr1:214783200-214790600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:214783200-214790600 Weak transcription Fetal Muscle Leg muscle
35 chr1:214783200-214794000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:214783200-214817800 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr1:214783400-214787600 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr1:214783400-214787800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:214783400-214789000 Weak transcription Fetal Lung lung
40 chr1:214783400-214791200 Weak transcription H9 Cell Line embryonic stem cell
41 chr1:214783400-214793000 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr1:214783400-214838800 Weak transcription Fetal Kidney kidney
43 chr1:214783600-214788200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr1:214783600-214788800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:214783600-214790400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr1:214784400-214787600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:214784400-214790400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr1:214784600-214834000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:214784800-214791000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr1:214784800-214803600 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015