The 2.0 version of rSNPBase

Variant report

Variant rs3792597
Chromosome Location chr3:121650872-121650873
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:121615800-121671600 Weak transcription Pancreas Pancrea
2 chr3:121616200-121659400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr3:121625000-121661200 Weak transcription Thymus Thymus
4 chr3:121626200-121651600 Strong transcription Primary B cells from peripheral blood blood
5 chr3:121627400-121659200 Weak transcription Lung lung
6 chr3:121627400-121664600 Weak transcription Aorta Aorta
7 chr3:121627600-121659200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr3:121628200-121659200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr3:121629800-121651400 Strong transcription Primary B cells from cord blood blood
10 chr3:121630200-121652200 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr3:121631800-121664800 Weak transcription Brain Angular Gyrus brain
12 chr3:121633200-121661200 Weak transcription Liver Liver
13 chr3:121633800-121661200 Weak transcription Right Ventricle heart
14 chr3:121634000-121651400 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr3:121634000-121651600 Strong transcription Primary monocytes fromperipheralblood blood
16 chr3:121634000-121660400 Weak transcription Fetal Kidney kidney
17 chr3:121634800-121667000 Weak transcription Brain Cingulate Gyrus brain
18 chr3:121635000-121670600 Weak transcription Brain Hippocampus Middle brain
19 chr3:121635200-121666800 Weak transcription Brain Substantia Nigra brain
20 chr3:121638400-121664800 Weak transcription Spleen Spleen
21 chr3:121638600-121661000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr3:121638800-121661000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr3:121640800-121651400 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr3:121640800-121659400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr3:121642400-121661600 Weak transcription Fetal Thymus thymus
26 chr3:121643400-121659200 Weak transcription Fetal Lung lung
27 chr3:121644000-121661200 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr3:121644400-121651400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr3:121646600-121661800 Weak transcription Ovary ovary
30 chr3:121646800-121666200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr3:121647200-121659400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr3:121647200-121660600 Weak transcription Small Intestine intestine
33 chr3:121647400-121651200 Strong transcription Cortex derived primary cultured neurospheres brain
34 chr3:121647400-121651400 Strong transcription Primary hematopoietic stem cells blood
35 chr3:121647400-121651800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr3:121647400-121652000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr3:121647400-121659200 Weak transcription Brain Inferior Temporal Lobe brain
38 chr3:121648400-121651600 Weak transcription Rectal Smooth Muscle rectum
39 chr3:121648400-121658000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr3:121648800-121657800 Weak transcription GM12878-XiMat blood
41 chr3:121648800-121659800 Weak transcription Left Ventricle heart
42 chr3:121649200-121658200 Weak transcription Fetal Muscle Trunk muscle
43 chr3:121649400-121651400 Strong transcription Adipose Nuclei Adipose
44 chr3:121649800-121651200 Strong transcription Skeletal Muscle Female skeletal muscle
45 chr3:121650000-121659200 Weak transcription Duodenum Mucosa Duodenum
46 chr3:121650400-121651400 Strong transcription Fetal Muscle Leg muscle
47 chr3:121650600-121652600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr3:121650600-121658000 Weak transcription Primary T cells from cord blood blood
49 chr3:121650600-121665800 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr3:121650600-121675600 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015