The 2.0 version of rSNPBase

Variant report

Variant rs866929
Chromosome Location chr3:121632507-121632508
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:121592800-121646800 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr3:121613800-121647200 Weak transcription Left Ventricle heart
3 chr3:121614000-121632800 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr3:121614000-121633200 Weak transcription Fetal Kidney kidney
5 chr3:121614000-121637800 Weak transcription Spleen Spleen
6 chr3:121614200-121634400 Weak transcription Brain Cingulate Gyrus brain
7 chr3:121615600-121633200 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr3:121615800-121671600 Weak transcription Pancreas Pancrea
9 chr3:121616200-121637600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr3:121616200-121659400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr3:121623400-121639200 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr3:121624000-121647800 Weak transcription Adipose Nuclei Adipose
13 chr3:121625000-121661200 Weak transcription Thymus Thymus
14 chr3:121625200-121640400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr3:121626200-121651600 Strong transcription Primary B cells from peripheral blood blood
16 chr3:121626800-121638600 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr3:121627200-121635800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr3:121627400-121634400 Weak transcription Primary T cells from cord blood blood
19 chr3:121627400-121641600 Weak transcription Fetal Muscle Leg muscle
20 chr3:121627400-121659200 Weak transcription Lung lung
21 chr3:121627400-121664600 Weak transcription Aorta Aorta
22 chr3:121627600-121633200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr3:121627600-121645200 Weak transcription Fetal Muscle Trunk muscle
24 chr3:121627600-121659200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr3:121627800-121633800 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr3:121627800-121635400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr3:121628200-121638200 Strong transcription GM12878-XiMat blood
28 chr3:121628200-121659200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr3:121628400-121637200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr3:121629800-121651400 Strong transcription Primary B cells from cord blood blood
31 chr3:121630200-121652200 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr3:121630400-121649600 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr3:121631600-121633600 Enhancers Primary monocytes fromperipheralblood blood
34 chr3:121631800-121632800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr3:121631800-121664800 Weak transcription Brain Angular Gyrus brain
36 chr3:121632000-121632800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr3:121632000-121634000 Weak transcription Brain Anterior Caudate brain
38 chr3:121632200-121632800 Weak transcription Brain Substantia Nigra brain
39 chr3:121632200-121633400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
40 chr3:121632400-121632600 Strong transcription Duodenum Mucosa Duodenum
41 chr3:121632400-121633000 Enhancers Primary hematopoietic stem cells blood
42 chr3:121632400-121633000 Genic enhancers Primary hematopoietic stem cells short term culture blood
43 chr3:121632400-121633600 Active TSS Brain Hippocampus Middle brain

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Last update: Aug 31, 2015