The 2.0 version of rSNPBase

Variant report

Variant rs3817601
Chromosome Location chr3:121642048-121642049
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:121592800-121646800 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr3:121613800-121647200 Weak transcription Left Ventricle heart
3 chr3:121615800-121671600 Weak transcription Pancreas Pancrea
4 chr3:121616200-121659400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr3:121624000-121647800 Weak transcription Adipose Nuclei Adipose
6 chr3:121625000-121661200 Weak transcription Thymus Thymus
7 chr3:121626200-121651600 Strong transcription Primary B cells from peripheral blood blood
8 chr3:121627400-121659200 Weak transcription Lung lung
9 chr3:121627400-121664600 Weak transcription Aorta Aorta
10 chr3:121627600-121645200 Weak transcription Fetal Muscle Trunk muscle
11 chr3:121627600-121659200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:121628200-121659200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr3:121629800-121651400 Strong transcription Primary B cells from cord blood blood
14 chr3:121630200-121652200 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr3:121630400-121649600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr3:121631800-121664800 Weak transcription Brain Angular Gyrus brain
17 chr3:121633200-121661200 Weak transcription Liver Liver
18 chr3:121633400-121642800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr3:121633400-121645200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr3:121633400-121646200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr3:121633600-121649000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr3:121633800-121661200 Weak transcription Right Ventricle heart
23 chr3:121634000-121651400 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr3:121634000-121651600 Strong transcription Primary monocytes fromperipheralblood blood
25 chr3:121634000-121660400 Weak transcription Fetal Kidney kidney
26 chr3:121634600-121646200 Weak transcription Duodenum Mucosa Duodenum
27 chr3:121634600-121647000 Weak transcription Brain Inferior Temporal Lobe brain
28 chr3:121634800-121649600 Weak transcription Brain Anterior Caudate brain
29 chr3:121634800-121667000 Weak transcription Brain Cingulate Gyrus brain
30 chr3:121635000-121670600 Weak transcription Brain Hippocampus Middle brain
31 chr3:121635200-121666800 Weak transcription Brain Substantia Nigra brain
32 chr3:121635400-121647800 Weak transcription Rectal Smooth Muscle rectum
33 chr3:121636000-121643400 Weak transcription Fetal Intestine Small intestine
34 chr3:121636400-121645400 Strong transcription Primary hematopoietic stem cells blood
35 chr3:121636800-121644000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr3:121638200-121645200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr3:121638400-121664800 Weak transcription Spleen Spleen
38 chr3:121638600-121661000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr3:121638800-121661000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr3:121640200-121648800 Strong transcription GM12878-XiMat blood
41 chr3:121640600-121642200 Strong transcription Primary T cells from cord blood blood
42 chr3:121640800-121651400 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr3:121640800-121659400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr3:121641000-121644000 Strong transcription Cortex derived primary cultured neurospheres brain
45 chr3:121641600-121642200 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015