Variant report

Variant rs3798309
Chromosome Location chr6:167423542-167423543
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:167413600-167425000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr6:167413600-167425000 Weak transcription Brain Substantia Nigra brain
3 chr6:167413600-167425000 Weak transcription Lung lung
4 chr6:167413600-167425200 Weak transcription Esophagus oesophagus
5 chr6:167413600-167428600 Weak transcription Aorta Aorta
6 chr6:167413600-167428800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr6:167413600-167428800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr6:167413600-167438800 Weak transcription Right Ventricle heart
9 chr6:167413600-167449200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr6:167413600-167452400 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr6:167413800-167436800 Weak transcription HSMMtube muscle
12 chr6:167414600-167424400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr6:167414600-167425000 Weak transcription Brain Angular Gyrus brain
14 chr6:167414600-167425000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr6:167414600-167425000 Weak transcription NHLF lung
16 chr6:167414600-167428600 Weak transcription Fetal Brain Male brain
17 chr6:167414600-167429200 Strong transcription HUES48 Cell Line embryonic stem cell
18 chr6:167414600-167429200 Strong transcription Primary B cells from cord blood blood
19 chr6:167414600-167430400 Strong transcription iPS-18 Cell Line embryonic stem cell
20 chr6:167414600-167433200 Strong transcription HUES6 Cell Line embryonic stem cell
21 chr6:167414600-167440800 Strong transcription iPS-20b Cell Line embryonic stem cell
22 chr6:167414600-167441000 Weak transcription Psoas Muscle Psoas
23 chr6:167414600-167448000 Weak transcription Small Intestine intestine
24 chr6:167414600-167450200 Weak transcription Stomach Mucosa stomach
25 chr6:167414800-167425000 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr6:167415200-167425000 Weak transcription Gastric stomach
27 chr6:167415200-167440800 Strong transcription HUES64 Cell Line embryonic stem cell
28 chr6:167415400-167424400 Weak transcription Fetal Brain Female brain
29 chr6:167415400-167424800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr6:167415400-167424800 Weak transcription Placenta Amnion Placenta Amnion
31 chr6:167415400-167454000 Strong transcription Fetal Thymus thymus
32 chr6:167415400-167456600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr6:167416000-167425000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr6:167416000-167444600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr6:167416200-167431800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr6:167416200-167437400 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr6:167417200-167455400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr6:167417600-167443000 Strong transcription Primary monocytes fromperipheralblood blood
39 chr6:167417600-167446000 Strong transcription Dnd41 blood
40 chr6:167417600-167454800 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr6:167417800-167429200 Strong transcription Primary T cells fromperipheralblood blood
42 chr6:167417800-167455200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr6:167418800-167429200 Strong transcription Osteobl bone
44 chr6:167419200-167424400 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr6:167419200-167432800 Strong transcription Fetal Muscle Leg muscle
46 chr6:167419400-167425000 Weak transcription Stomach Smooth Muscle stomach
47 chr6:167419600-167425000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr6:167419600-167425000 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr6:167419600-167425000 Weak transcription Rectal Smooth Muscle rectum
50 chr6:167419600-167425600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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