Variant report

Variant rs3800159
Chromosome Location chr6:2130774-2130775
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:2081600-2131800 Weak transcription Fetal Intestine Small intestine
2 chr6:2104400-2132000 Weak transcription Fetal Intestine Large intestine
3 chr6:2109600-2133600 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr6:2114200-2134200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr6:2116000-2134200 Weak transcription H9 Cell Line embryonic stem cell
6 chr6:2118000-2131800 Weak transcription Duodenum Mucosa Duodenum
7 chr6:2119600-2132600 Weak transcription NHEK skin
8 chr6:2123600-2134000 Weak transcription Gastric stomach
9 chr6:2125000-2134000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr6:2125000-2134000 Weak transcription Pancreas Pancrea
11 chr6:2127000-2130800 Enhancers Primary hematopoietic stem cells blood
12 chr6:2128000-2134400 Weak transcription Right Atrium heart
13 chr6:2128000-2160800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr6:2128400-2132200 Weak transcription HUVEC blood vessel
15 chr6:2129200-2130800 Enhancers iPS-18 Cell Line embryonic stem cell
16 chr6:2129600-2130800 Enhancers HUES6 Cell Line embryonic stem cell
17 chr6:2129600-2131800 Weak transcription Small Intestine intestine
18 chr6:2129600-2132600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr6:2129600-2134000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:2129800-2133800 Weak transcription HepG2 liver
21 chr6:2130000-2131000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr6:2130000-2132400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:2130000-2132600 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr6:2130000-2132800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr6:2130200-2130800 Enhancers GM12878-XiMat blood
26 chr6:2130200-2133200 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr6:2130200-2133600 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr6:2130200-2133600 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr6:2130200-2134200 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr6:2130600-2130800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr6:2130600-2133800 Weak transcription iPS-20b Cell Line embryonic stem cell

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