The 2.0 version of rSNPBase

Variant report

Variant rs3813227
Chromosome Location chr2:73651967-73651968
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:73622800-73662800 Weak transcription Right Ventricle heart
2 chr2:73626600-73653200 Weak transcription Left Ventricle heart
3 chr2:73626800-73662600 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr2:73626800-73662800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr2:73626800-73662800 Weak transcription Aorta Aorta
6 chr2:73626800-73663400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr2:73626800-73664000 Weak transcription Thymus Thymus
8 chr2:73627400-73652000 Weak transcription Stomach Smooth Muscle stomach
9 chr2:73627400-73664400 Weak transcription Pancreas Pancrea
10 chr2:73628800-73663000 Weak transcription Hela-S3 cervix
11 chr2:73631400-73652600 Weak transcription Fetal Intestine Small intestine
12 chr2:73631400-73659800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr2:73632400-73658800 Weak transcription Liver Liver
14 chr2:73633200-73662800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr2:73634000-73659200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr2:73634000-73661400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr2:73634000-73663200 Weak transcription Psoas Muscle Psoas
18 chr2:73634200-73652200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr2:73634400-73662000 Weak transcription Lung lung
20 chr2:73634400-73662800 Weak transcription Esophagus oesophagus
21 chr2:73634600-73661800 Weak transcription Brain Germinal Matrix brain
22 chr2:73634800-73652600 Weak transcription Fetal Intestine Large intestine
23 chr2:73634800-73659600 Weak transcription Duodenum Mucosa Duodenum
24 chr2:73635600-73659600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr2:73637200-73655800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr2:73637200-73659600 Weak transcription GM12878-XiMat blood
27 chr2:73637600-73662800 Weak transcription Fetal Stomach stomach
28 chr2:73637800-73662400 Weak transcription A549 lung
29 chr2:73637800-73663600 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr2:73637800-73676200 Weak transcription Fetal Brain Male brain
31 chr2:73638600-73661400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:73639200-73675400 Weak transcription HMEC breast
33 chr2:73642200-73666000 Weak transcription NHLF lung
34 chr2:73643400-73663000 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr2:73644600-73662800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr2:73645400-73662600 Weak transcription Brain Substantia Nigra brain
37 chr2:73645400-73675200 Weak transcription H9 Cell Line embryonic stem cell
38 chr2:73645600-73653800 Weak transcription NHEK skin
39 chr2:73645600-73655200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr2:73645600-73661800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:73645600-73663000 Weak transcription NHDF-Ad bronchial
42 chr2:73645600-73675200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:73645600-73676600 Weak transcription NH-A brain
44 chr2:73645600-73685600 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr2:73645800-73662600 Weak transcription Brain Inferior Temporal Lobe brain
46 chr2:73645800-73662800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr2:73646000-73659600 Weak transcription Brain Angular Gyrus brain
48 chr2:73646000-73664000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr2:73646200-73654400 Strong transcription Primary T helper cells fromperipheralblood blood
50 chr2:73646200-73661400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015