Variant report

Variant rs3822468
Chromosome Location chr5:36636495-36636496
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:36608800-36639600 Weak transcription Esophagus oesophagus
2 chr5:36616800-36651200 Weak transcription Psoas Muscle Psoas
3 chr5:36620800-36638000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr5:36624600-36637800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr5:36628600-36641000 Weak transcription Fetal Brain Male brain
6 chr5:36629400-36637800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr5:36630400-36638200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr5:36630400-36638400 Weak transcription Fetal Intestine Large intestine
9 chr5:36630600-36641400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr5:36630800-36638200 Weak transcription H9 Cell Line embryonic stem cell
11 chr5:36630800-36646200 Weak transcription NHDF-Ad bronchial
12 chr5:36631000-36637600 Strong transcription HSMM muscle
13 chr5:36631000-36638000 Weak transcription Right Ventricle heart
14 chr5:36631000-36638200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr5:36631000-36638400 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr5:36631000-36654400 Weak transcription H1 Cell Line embryonic stem cell
17 chr5:36631200-36638000 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr5:36631200-36638200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr5:36631200-36639200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr5:36631400-36638200 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr5:36631400-36641000 Weak transcription Osteobl bone
22 chr5:36631600-36636800 Weak transcription Fetal Muscle Trunk muscle
23 chr5:36631800-36641000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr5:36632000-36638200 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr5:36632200-36636800 Weak transcription Primary monocytes fromperipheralblood blood
26 chr5:36632200-36654800 Weak transcription Fetal Brain Female brain
27 chr5:36632600-36636800 Weak transcription Brain Angular Gyrus brain
28 chr5:36632600-36639200 Weak transcription Brain Hippocampus Middle brain
29 chr5:36632600-36641200 Weak transcription Brain Cingulate Gyrus brain
30 chr5:36632600-36651800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr5:36632600-36654600 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr5:36633400-36640200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:36633600-36638400 Weak transcription Brain Substantia Nigra brain
34 chr5:36633800-36639600 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr5:36634000-36652200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr5:36635000-36638400 Strong transcription Fetal Muscle Leg muscle
37 chr5:36635200-36636800 Strong transcription Brain Anterior Caudate brain
38 chr5:36635200-36637600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr5:36635200-36638800 Strong transcription Brain Inferior Temporal Lobe brain
40 chr5:36635400-36637200 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr5:36635400-36639600 Strong transcription Adipose Nuclei Adipose
42 chr5:36635400-36640000 Genic enhancers Cortex derived primary cultured neurospheres brain
43 chr5:36635600-36637200 Strong transcription Hela-S3 cervix
44 chr5:36635600-36637400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr5:36635600-36654200 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr5:36635800-36636600 Weak transcription Left Ventricle heart
47 chr5:36635800-36637000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr5:36635800-36637000 Enhancers HMEC breast
49 chr5:36635800-36637000 Enhancers NHEK skin
50 chr5:36635800-36638800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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