The 2.0 version of rSNPBase

Variant report

Variant rs3849103
Chromosome Location chr5:16470950-16470951
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16466800-16471000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:16466800-16477400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr5:16467000-16476600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:16467400-16478000 Weak transcription Fetal Muscle Trunk muscle
5 chr5:16467600-16479200 Weak transcription Primary B cells from cord blood blood
6 chr5:16468000-16477000 Weak transcription Primary hematopoietic stem cells blood
7 chr5:16468000-16481800 Weak transcription Fetal Thymus thymus
8 chr5:16468200-16471000 Enhancers Skeletal Muscle Male skeletal muscle
9 chr5:16468200-16471000 Weak transcription Stomach Mucosa stomach
10 chr5:16468200-16471400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr5:16468200-16472200 Weak transcription Osteobl bone
12 chr5:16468200-16474000 Weak transcription Liver Liver
13 chr5:16468200-16474800 Weak transcription Primary T cells from cord blood blood
14 chr5:16468200-16474800 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr5:16468200-16474800 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr5:16468200-16474800 Weak transcription Thymus Thymus
17 chr5:16468200-16475000 Weak transcription Duodenum Mucosa Duodenum
18 chr5:16468200-16475000 Weak transcription Esophagus oesophagus
19 chr5:16468200-16475000 Weak transcription Fetal Intestine Large intestine
20 chr5:16468200-16475000 Weak transcription Lung lung
21 chr5:16468200-16475400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr5:16468200-16476200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr5:16468200-16476400 Weak transcription Ovary ovary
24 chr5:16468200-16476800 Weak transcription Brain Substantia Nigra brain
25 chr5:16468200-16477800 Weak transcription Brain Anterior Caudate brain
26 chr5:16468200-16480200 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr5:16468200-16480600 Weak transcription Fetal Intestine Small intestine
28 chr5:16468200-16481000 Weak transcription Brain Hippocampus Middle brain
29 chr5:16468200-16481600 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr5:16468200-16482000 Weak transcription Primary T cells fromperipheralblood blood
31 chr5:16468200-16483200 Weak transcription A549 lung
32 chr5:16468200-16483400 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr5:16468200-16484000 Weak transcription Small Intestine intestine
34 chr5:16468200-16485000 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr5:16468200-16487400 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr5:16468200-16489600 Weak transcription Brain Cingulate Gyrus brain
37 chr5:16468200-16490800 Weak transcription Right Ventricle heart
38 chr5:16468400-16471400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr5:16468400-16474000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr5:16468400-16474600 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr5:16468400-16475800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr5:16468400-16477200 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr5:16468400-16480800 Weak transcription HSMM muscle
44 chr5:16468400-16481000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:16468400-16493000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr5:16468600-16476200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr5:16468600-16481000 Weak transcription NHDF-Ad bronchial
48 chr5:16468600-16481000 Weak transcription NHEK skin
49 chr5:16468800-16479800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr5:16468800-16481200 Weak transcription HMEC breast

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Last update: Aug 31, 2015