The 2.0 version of rSNPBase

Variant report

Variant rs3849579
Chromosome Location chr4:78646389-78646390
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:78628400-78648400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr4:78629000-78649400 Weak transcription HMEC breast
3 chr4:78629200-78676600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr4:78629400-78649400 Weak transcription Spleen Spleen
5 chr4:78629400-78656200 Weak transcription Small Intestine intestine
6 chr4:78630200-78660000 Weak transcription Muscle Satellite Cultured Cells --
7 chr4:78631200-78656000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr4:78631600-78649400 Weak transcription Brain Hippocampus Middle brain
9 chr4:78631600-78652600 Weak transcription Esophagus oesophagus
10 chr4:78631800-78649400 Weak transcription Aorta Aorta
11 chr4:78632000-78651800 Weak transcription HepG2 liver
12 chr4:78632600-78697800 Weak transcription Colonic Mucosa Colon
13 chr4:78634000-78647600 Weak transcription HSMM muscle
14 chr4:78635600-78652800 Strong transcription Primary B cells from peripheral blood blood
15 chr4:78636000-78651600 Weak transcription Fetal Heart heart
16 chr4:78636200-78647400 Weak transcription Fetal Kidney kidney
17 chr4:78636200-78649600 Weak transcription Colon Smooth Muscle Colon
18 chr4:78636400-78659000 Weak transcription Psoas Muscle Psoas
19 chr4:78636800-78649400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr4:78636800-78655400 Strong transcription Primary T cells fromperipheralblood blood
21 chr4:78637200-78647400 Weak transcription K562 blood
22 chr4:78637200-78649400 Weak transcription NHDF-Ad bronchial
23 chr4:78637400-78649400 Weak transcription Ovary ovary
24 chr4:78637400-78661200 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr4:78637400-78673200 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr4:78637600-78649400 Weak transcription Brain Cingulate Gyrus brain
27 chr4:78638800-78652200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr4:78638800-78655200 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr4:78639200-78649400 Weak transcription HUVEC blood vessel
30 chr4:78639200-78661200 Weak transcription Brain Inferior Temporal Lobe brain
31 chr4:78639400-78649400 Weak transcription Fetal Brain Female brain
32 chr4:78639400-78650400 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr4:78639400-78671200 Weak transcription Brain Germinal Matrix brain
34 chr4:78639600-78652800 Weak transcription NHEK skin
35 chr4:78639800-78649400 Weak transcription Right Ventricle heart
36 chr4:78640000-78649400 Weak transcription Brain Anterior Caudate brain
37 chr4:78640000-78653000 Weak transcription GM12878-XiMat blood
38 chr4:78640200-78652800 Strong transcription Primary monocytes fromperipheralblood blood
39 chr4:78640200-78652800 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr4:78640200-78656200 Strong transcription Fetal Thymus thymus
41 chr4:78640400-78649800 Weak transcription Osteobl bone
42 chr4:78640400-78653600 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr4:78640400-78654400 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr4:78640400-78654400 Strong transcription Primary T helper cells PMA-I stimulated --
45 chr4:78640400-78655800 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr4:78640600-78650800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr4:78640600-78651000 Strong transcription Adipose Nuclei Adipose
48 chr4:78640600-78652200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr4:78640600-78653000 Strong transcription Liver Liver
50 chr4:78640600-78654400 Strong transcription Dnd41 blood

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Last update: Aug 31, 2015