Variant report
| Variant | rs386547 |
|---|---|
| Chromosome Location | chr5:145200600-145200601 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:145158400-145207000 | Weak transcription | Esophagus | oesophagus |
| 2 | chr5:145162800-145212800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr5:145167400-145200600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 4 | chr5:145168000-145203600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 5 | chr5:145170600-145213400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 6 | chr5:145172800-145214200 | Weak transcription | Right Ventricle | heart |
| 7 | chr5:145174200-145209200 | Weak transcription | Colon Smooth Muscle | Colon |
| 8 | chr5:145175200-145205000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 9 | chr5:145177200-145206800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 10 | chr5:145177200-145209000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 11 | chr5:145177200-145209200 | Weak transcription | NH-A | brain |
| 12 | chr5:145177400-145209000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 13 | chr5:145179200-145207000 | Weak transcription | Pancreas | Pancrea |
| 14 | chr5:145179400-145209400 | Weak transcription | Stomach Mucosa | stomach |
| 15 | chr5:145182800-145207000 | Weak transcription | Small Intestine | intestine |
| 16 | chr5:145183600-145214000 | Weak transcription | Fetal Kidney | kidney |
| 17 | chr5:145185800-145202400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 18 | chr5:145187000-145209200 | Weak transcription | A549 | lung |
| 19 | chr5:145191600-145206400 | Weak transcription | Liver | Liver |
| 20 | chr5:145192000-145203600 | Weak transcription | Adipose Nuclei | Adipose |
| 21 | chr5:145192400-145203600 | Weak transcription | Left Ventricle | heart |
| 22 | chr5:145192800-145200600 | Weak transcription | Lung | lung |
| 23 | chr5:145192800-145209200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 24 | chr5:145193000-145204000 | Weak transcription | Spleen | Spleen |
| 25 | chr5:145193800-145201400 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 26 | chr5:145193800-145202000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 27 | chr5:145194000-145201000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 28 | chr5:145194400-145201800 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 29 | chr5:145194400-145201800 | Strong transcription | Fetal Intestine Large | intestine |
| 30 | chr5:145194800-145209000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 31 | chr5:145195200-145212800 | Weak transcription | Colonic Mucosa | Colon |
| 32 | chr5:145195800-145203600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 33 | chr5:145196200-145211800 | Weak transcription | Gastric | stomach |
| 34 | chr5:145196800-145203600 | Weak transcription | Fetal Lung | lung |
| 35 | chr5:145196800-145214000 | Weak transcription | Fetal Stomach | stomach |
| 36 | chr5:145197400-145201400 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 37 | chr5:145197800-145201800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 38 | chr5:145197800-145203600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 39 | chr5:145197800-145206600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 40 | chr5:145197800-145206600 | Weak transcription | HMEC | breast |
| 41 | chr5:145197800-145206800 | Weak transcription | HepG2 | liver |
| 42 | chr5:145197800-145209200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 43 | chr5:145198000-145203600 | Weak transcription | Fetal Heart | heart |
| 44 | chr5:145198000-145203600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 45 | chr5:145198000-145206400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 46 | chr5:145198000-145206600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 47 | chr5:145198000-145213600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 48 | chr5:145198200-145206400 | Weak transcription | K562 | blood |
| 49 | chr5:145198200-145210200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 50 | chr5:145198600-145206600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
