Variant report

Variant rs3898947
Chromosome Location chr7:136990935-136990936
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:136975200-136991000 Weak transcription iPS-18 Cell Line embryonic stem cell
2 chr7:136976600-136991000 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr7:136982800-137008400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr7:136987000-136991800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr7:136987800-136991600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr7:136989600-136991200 Flanking Active TSS Brain Substantia Nigra brain
7 chr7:136989600-136991800 Enhancers Fetal Brain Male brain
8 chr7:136989800-136992000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr7:136990000-136991800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
10 chr7:136990000-136997800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr7:136990200-136991000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr7:136990200-136991200 Enhancers Brain Germinal Matrix brain
13 chr7:136990200-136991200 Enhancers NH-A brain
14 chr7:136990200-136991400 Enhancers Fetal Lung lung
15 chr7:136990400-136991200 Enhancers Fetal Stomach stomach
16 chr7:136990400-136992800 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr7:136990600-136991000 Flanking Active TSS Brain Inferior Temporal Lobe brain
18 chr7:136990600-136991200 Flanking Active TSS Brain Angular Gyrus brain
19 chr7:136990600-136991800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr7:136990600-136991800 Enhancers Fetal Heart heart
21 chr7:136990600-136991800 Enhancers Fetal Muscle Leg muscle
22 chr7:136990600-136992200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
23 chr7:136990800-136991000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
24 chr7:136990800-136991000 Flanking Active TSS Fetal Brain Female brain
25 chr7:136990800-136991200 Enhancers HUES48 Cell Line embryonic stem cell
26 chr7:136990800-136991200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr7:136990800-136991200 Flanking Active TSS Brain Cingulate Gyrus brain
28 chr7:136990800-136991400 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr7:136990800-136991400 Flanking Active TSS Brain Anterior Caudate brain
30 chr7:136990800-136991800 Flanking Active TSS Brain Hippocampus Middle brain

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