Variant report

Variant	rs3913727
Chromosome Location	chr5:41542731-41542732
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10805660	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12187650	0.88[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1457133	0.81[AMR][1000 genomes]
rs2644043	0.88[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2644044	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs318017	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs318021	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4106195	0.87[ASN][1000 genomes]
rs4588635	0.85[ASN][1000 genomes]
rs4957156	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4957158	0.86[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs508669	0.85[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs627744	0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs694218	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1028390	chr5:41537220-41561373	Weak transcription Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41542200-41542800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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