Variant report

Variant	rs3922898
Chromosome Location	chr2:50062829-50062830
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs1013597	0.81[EUR][1000 genomes]
rs10495988	0.87[EUR][1000 genomes]
rs11125278	0.81[EUR][1000 genomes]
rs11885824	0.82[EUR][1000 genomes]
rs12466419	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12476729	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12618646	0.80[EUR][1000 genomes]
rs12995774	0.87[EUR][1000 genomes]
rs12998798	0.88[EUR][1000 genomes]
rs13000689	0.90[EUR][1000 genomes]
rs13007882	0.80[EUR][1000 genomes]
rs13022108	0.80[EUR][1000 genomes]
rs13023203	0.90[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs13025974	0.88[EUR][1000 genomes]
rs13028383	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17039412	0.90[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs17039430	0.89[EUR][1000 genomes]
rs17039448	0.83[EUR][1000 genomes]
rs17039452	0.81[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs17039454	0.89[EUR][1000 genomes]
rs17039456	0.83[EUR][1000 genomes]
rs17039484	0.80[EUR][1000 genomes]
rs2241752	0.81[EUR][1000 genomes]
rs34533417	0.81[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs34918442	0.86[EUR][1000 genomes]
rs35371642	0.81[EUR][1000 genomes]
rs35373906	0.81[EUR][1000 genomes]
rs3935314	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4143112	0.81[EUR][1000 genomes]
rs57936567	0.80[EUR][1000 genomes]
rs60884569	0.83[EUR][1000 genomes]
rs62132409	0.82[EUR][1000 genomes]
rs62132414	0.81[EUR][1000 genomes]
rs62132439	0.80[EUR][1000 genomes]
rs6745765	0.80[EUR][1000 genomes]
rs6758043	0.81[EUR][1000 genomes]
rs6758276	0.80[EUR][1000 genomes]
rs7598993	0.81[EUR][1000 genomes]
rs920033	0.81[EUR][1000 genomes]
rs920034	0.81[EUR][1000 genomes]
rs920035	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762559	chr2:49986201-50076458	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:50062400-50063400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr2:50062800-50065600	Enhancers	Fetal Heart	heart

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