Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:165506382..165508384-chr1:165509040..165511193,2	K562	blood:
2	chr1:165506171..165507882-chr1:165509693..165511410,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs172258	0.84[YRI][hapmap]
rs172259	0.93[AFR][1000 genomes]
rs176231	0.93[AFR][1000 genomes]
rs190799	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2254777	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2254782	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2433133	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2433135	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2433139	0.90[AFR][1000 genomes]
rs2478256	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2478263	0.88[AFR][1000 genomes]
rs2485407	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs285425	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs285448	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs285459	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs285460	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs285465	0.93[AFR][1000 genomes]
rs285466	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs285477	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs437919	1.00[EUR][1000 genomes]
rs454544	1.00[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165501600-165508600	Weak transcription	Fetal Muscle Trunk	muscle
2	chr1:165502600-165508800	Weak transcription	Right Ventricle	heart
3	chr1:165502800-165508400	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr1:165503600-165509000	Weak transcription	Psoas Muscle	Psoas
5	chr1:165503600-165509000	Weak transcription	Right Atrium	heart
6	chr1:165504200-165508400	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr1:165505600-165513000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr1:165505800-165508000	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr1:165506200-165508200	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr1:165506800-165507200	Enhancers	Brain Germinal Matrix	brain
11	chr1:165507000-165507600	Enhancers	Cortex derived primary cultured neurospheres	brain
12	chr1:165507000-165508000	Enhancers	Fetal Muscle Leg	muscle

Quick Search: