Variant report

Variant	rs176231
Chromosome Location	chr1:165490171-165490172
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:165486942..165488899-chr1:165489410..165491188,2	K562	blood:

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10158373	1.00[ASN][1000 genomes]
rs10737513	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11801044	1.00[CEU][hapmap]
rs11806754	1.00[CEU][hapmap]
rs12239601	0.81[EUR][1000 genomes]
rs12566566	0.81[EUR][1000 genomes]
rs16827869	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16845784	0.81[EUR][1000 genomes]
rs16846014	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16846040	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16847487	1.00[CEU][hapmap]
rs172258	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[YRI][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs172259	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs190799	0.90[AFR][1000 genomes]
rs2254777	0.93[AFR][1000 genomes]
rs2254782	0.93[AFR][1000 genomes]
rs2348732	1.00[ASN][1000 genomes]
rs2433133	0.95[AFR][1000 genomes]
rs2433134	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2433135	0.95[AFR][1000 genomes]
rs2433139	0.84[AFR][1000 genomes]
rs2478256	0.87[AFR][1000 genomes]
rs2478263	0.85[AFR][1000 genomes]
rs2485407	0.90[AFR][1000 genomes]
rs285425	0.93[AFR][1000 genomes]
rs285448	0.88[YRI][hapmap];0.93[AFR][1000 genomes]
rs285459	0.93[AFR][1000 genomes]
rs285460	0.93[AFR][1000 genomes]
rs285465	0.90[AFR][1000 genomes]
rs285466	0.95[AFR][1000 genomes]
rs285471	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs285477	0.95[AFR][1000 genomes]
rs406878	0.93[AFR][1000 genomes]
rs72692003	0.81[EUR][1000 genomes]
rs72692004	0.81[EUR][1000 genomes]
rs72692012	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692014	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692015	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692041	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692042	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72693813	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72693821	1.00[ASN][1000 genomes]
rs72693831	1.00[ASN][1000 genomes]
rs72693858	1.00[ASN][1000 genomes]
rs7355084	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs913085	0.81[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165483800-165493400	Weak transcription	Fetal Heart	heart

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