Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:165476266..165479169-chr14:54928922..54931145,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RXRG-1	chr1:165477697-165477916	ENSG00000237463.1

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10158373	1.00[ASN][1000 genomes]
rs10737513	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11801044	1.00[CEU][hapmap]
rs12239601	0.81[EUR][1000 genomes]
rs12566566	0.81[EUR][1000 genomes]
rs16827869	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16845784	0.81[EUR][1000 genomes]
rs16846014	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16846040	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs172258	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs172259	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs176231	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2348732	1.00[ASN][1000 genomes]
rs285471	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs444317	0.96[AFR][1000 genomes]
rs72692003	0.81[EUR][1000 genomes]
rs72692004	0.81[EUR][1000 genomes]
rs72692012	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692014	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692015	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692041	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692042	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72693813	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72693821	1.00[ASN][1000 genomes]
rs72693831	1.00[ASN][1000 genomes]
rs72693858	1.00[ASN][1000 genomes]
rs7355084	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs913085	0.81[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165466800-165479600	Weak transcription	Fetal Heart	heart
2	chr1:165467600-165483200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:165476800-165478000	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr1:165477800-165479200	Weak transcription	Psoas Muscle	Psoas

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