Variant report
Variant | rs2348732 |
---|---|
Chromosome Location | chr1:165560567-165560568 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10158373 | 1.00[ASN][1000 genomes] |
rs10737513 | 1.00[ASN][1000 genomes] |
rs16827869 | 1.00[ASN][1000 genomes] |
rs16846014 | 1.00[ASN][1000 genomes] |
rs16846040 | 1.00[ASN][1000 genomes] |
rs172258 | 1.00[ASN][1000 genomes] |
rs172259 | 1.00[ASN][1000 genomes] |
rs17408354 | 0.81[EUR][1000 genomes] |
rs176231 | 1.00[ASN][1000 genomes] |
rs2433134 | 1.00[ASN][1000 genomes] |
rs285471 | 1.00[ASN][1000 genomes] |
rs61804063 | 0.82[EUR][1000 genomes] |
rs61804064 | 0.82[EUR][1000 genomes] |
rs61804065 | 0.82[EUR][1000 genomes] |
rs72692012 | 1.00[ASN][1000 genomes] |
rs72692014 | 1.00[ASN][1000 genomes] |
rs72692015 | 1.00[ASN][1000 genomes] |
rs72692041 | 1.00[ASN][1000 genomes] |
rs72692042 | 1.00[ASN][1000 genomes] |
rs72693813 | 1.00[ASN][1000 genomes] |
rs72693821 | 1.00[ASN][1000 genomes] |
rs72693831 | 1.00[ASN][1000 genomes] |
rs72693858 | 1.00[ASN][1000 genomes] |
rs7355084 | 0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv429902 | chr1:165531342-165574342 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:165547400-165566800 | Weak transcription | Psoas Muscle | Psoas |