Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:165361798..165362919-chr1:165561812..165563315,19	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs17406242	0.86[AMR][1000 genomes]
rs17407838	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17408354	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17415428	0.86[AMR][1000 genomes]
rs2348732	0.82[EUR][1000 genomes]
rs41267556	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61800605	0.81[AMR][1000 genomes]
rs61800606	0.81[AMR][1000 genomes]
rs61800629	0.86[AMR][1000 genomes]
rs61800650	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61800652	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61800653	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61800654	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61804063	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61804065	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61804066	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6662536	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6676948	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72692043	0.82[AMR][1000 genomes]
rs72693832	0.86[AMR][1000 genomes]
rs7355084	0.82[EUR][1000 genomes]
rs7512192	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7517990	0.81[AMR][1000 genomes]
rs7521108	0.81[AMR][1000 genomes]
rs7543329	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429902	chr1:165531342-165574342	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165547400-165566800	Weak transcription	Psoas Muscle	Psoas
2	chr1:165562800-165566600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr1:165563000-165564200	Enhancers	Brain Germinal Matrix	brain

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