Variant report

Variant	rs72692042
Chromosome Location	chr1:165497185-165497186
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10158373	1.00[ASN][1000 genomes]
rs10737513	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12239601	0.92[EUR][1000 genomes]
rs12566566	0.92[EUR][1000 genomes]
rs16827869	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16845784	0.92[EUR][1000 genomes]
rs16846014	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16846040	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs172258	1.00[ASN][1000 genomes]
rs172259	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs176231	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2013490	0.84[EUR][1000 genomes]
rs2348732	1.00[ASN][1000 genomes]
rs2433134	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs285471	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692003	0.92[EUR][1000 genomes]
rs72692004	0.92[EUR][1000 genomes]
rs72692012	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692014	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692015	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692034	1.00[AFR][1000 genomes]
rs72692041	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72693813	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72693821	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72693830	0.84[EUR][1000 genomes]
rs72693831	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72693858	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7355084	1.00[ASN][1000 genomes]
rs913085	0.92[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165496000-165497400	Flanking Active TSS	Fetal Heart	heart
2	chr1:165496600-165497200	Enhancers	Fetal Muscle Leg	muscle
3	chr1:165496800-165497200	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr1:165497000-165497200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr1:165497000-165497200	Enhancers	Right Ventricle	heart
6	chr1:165497000-165497200	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr1:165497000-165501400	Weak transcription	Left Ventricle	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links