The 2.0 version of rSNPBase

Variant report

Variant rs41266072
Chromosome Location chr1:174979635-174979636
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174969800-174981600 Weak transcription Gastric stomach
2 chr1:174970000-174982400 Weak transcription Esophagus oesophagus
3 chr1:174970000-174991800 Weak transcription Stomach Mucosa stomach
4 chr1:174970200-174981200 Weak transcription Right Ventricle heart
5 chr1:174970600-174981800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:174970800-174980800 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr1:174970800-174986000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:174971000-174991600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr1:174972000-174981000 Weak transcription Fetal Intestine Small intestine
10 chr1:174972600-174981800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:174973000-174982200 Weak transcription Fetal Brain Male brain
12 chr1:174973000-174990600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:174973200-174982000 Weak transcription Small Intestine intestine
14 chr1:174973200-174983600 Strong transcription K562 blood
15 chr1:174973200-174987800 Strong transcription HUES48 Cell Line embryonic stem cell
16 chr1:174973200-174987800 Strong transcription HUES64 Cell Line embryonic stem cell
17 chr1:174973200-174988200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:174973600-174987800 Strong transcription HUES6 Cell Line embryonic stem cell
19 chr1:174973600-174988200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:174973600-174990400 Strong transcription Primary T cells from cord blood blood
21 chr1:174973800-174980600 Strong transcription H9 Cell Line embryonic stem cell
22 chr1:174973800-174983800 Strong transcription NH-A brain
23 chr1:174973800-174984000 Strong transcription Hela-S3 cervix
24 chr1:174973800-174984600 Strong transcription NHDF-Ad bronchial
25 chr1:174973800-174987600 Strong transcription iPS-18 Cell Line embryonic stem cell
26 chr1:174973800-174987800 Strong transcription H1 Cell Line embryonic stem cell
27 chr1:174973800-174987800 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr1:174973800-174987800 Strong transcription Primary T cells fromperipheralblood blood
29 chr1:174973800-174987800 Strong transcription Fetal Intestine Large intestine
30 chr1:174973800-174987800 Strong transcription Fetal Muscle Trunk muscle
31 chr1:174973800-174988200 Strong transcription Primary hematopoietic stem cells blood
32 chr1:174973800-174988400 Strong transcription Fetal Thymus thymus
33 chr1:174973800-174988800 Strong transcription Primary B cells from peripheral blood blood
34 chr1:174973800-174988800 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:174973800-174989800 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr1:174974000-174987800 Strong transcription Liver Liver
37 chr1:174974000-174988200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:174974000-174988400 Strong transcription Duodenum Mucosa Duodenum
39 chr1:174974200-174979800 Strong transcription Fetal Brain Female brain
40 chr1:174974200-174980000 Strong transcription Primary B cells from cord blood blood
41 chr1:174974200-174980000 Strong transcription Brain Inferior Temporal Lobe brain
42 chr1:174974200-174984000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:174974200-174984400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:174974200-174985200 Strong transcription Fetal Muscle Leg muscle
45 chr1:174974200-174987600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr1:174974200-174987800 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr1:174974200-174987800 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr1:174974200-174987800 Strong transcription Rectal Mucosa Donor 31 rectum
49 chr1:174974200-174987800 Strong transcription Sigmoid Colon Sigmoid Colon
50 chr1:174974200-174987800 Strong transcription A549 lung

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Last update: Aug 31, 2015