Variant report

Variant rs41271312
Chromosome Location chr6:55039416-55039417
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:55038800-55039800 Active TSS Fetal Brain Female brain
2 chr6:55039000-55039600 Bivalent Enhancer Primary hematopoietic stem cells blood
3 chr6:55039000-55039600 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr6:55039000-55039600 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
5 chr6:55039000-55039800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr6:55039000-55039800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
7 chr6:55039000-55039800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
8 chr6:55039000-55040000 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr6:55039000-55040000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
10 chr6:55039000-55040200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
11 chr6:55039000-55040200 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
12 chr6:55039000-55040200 Enhancers Pancreas Pancrea
13 chr6:55039000-55040200 Active TSS Right Atrium heart
14 chr6:55039000-55040200 Bivalent/Poised TSS Stomach Smooth Muscle stomach
15 chr6:55039000-55040400 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
16 chr6:55039000-55040400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
17 chr6:55039000-55040600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
18 chr6:55039000-55040600 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
19 chr6:55039000-55040600 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
20 chr6:55039000-55040600 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr6:55039000-55040800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
22 chr6:55039000-55040800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
23 chr6:55039200-55039600 Flanking Bivalent TSS/Enh H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr6:55039200-55039600 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
25 chr6:55039200-55039600 Active TSS Breast Myoepithelial Primary Cells Breast
26 chr6:55039200-55039600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr6:55039200-55039600 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
28 chr6:55039200-55039600 Active TSS Colon Smooth Muscle Colon
29 chr6:55039200-55039600 Bivalent/Poised TSS Duodenum Mucosa Duodenum
30 chr6:55039200-55039600 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
31 chr6:55039200-55039600 Flanking Bivalent TSS/Enh Fetal Lung lung
32 chr6:55039200-55039600 Bivalent Enhancer Placenta Amnion Placenta Amnion
33 chr6:55039200-55039600 Bivalent/Poised TSS NH-A brain
34 chr6:55039200-55039800 Bivalent/Poised TSS Primary T cells from cord blood blood
35 chr6:55039200-55039800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr6:55039200-55039800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
37 chr6:55039200-55039800 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
38 chr6:55039200-55039800 Bivalent/Poised TSS Brain Substantia Nigra brain
39 chr6:55039200-55040000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr6:55039200-55040000 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr6:55039200-55040000 Bivalent/Poised TSS iPS DF 19.11 Cell Line embryonic stem cell
42 chr6:55039200-55040000 Bivalent/Poised TSS Brain Angular Gyrus brain
43 chr6:55039200-55040000 Active TSS Brain Anterior Caudate brain
44 chr6:55039200-55040000 Active TSS Pancreatic Islets Pancreatic Islet
45 chr6:55039200-55040000 Enhancers Gastric stomach
46 chr6:55039200-55040000 Bivalent/Poised TSS Psoas Muscle Psoas
47 chr6:55039200-55040000 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
48 chr6:55039200-55040400 Active TSS Right Ventricle heart
49 chr6:55039200-55040800 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
50 chr6:55039400-55039600 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links