The 2.0 version of rSNPBase

Variant report

Variant rs41281928
Chromosome Location chr9:100079386-100079387
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100069400-100092800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr9:100069600-100094400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr9:100069800-100086400 Weak transcription H9 Cell Line embryonic stem cell
4 chr9:100070000-100091400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr9:100070000-100093800 Weak transcription Psoas Muscle Psoas
6 chr9:100070000-100098000 Weak transcription Small Intestine intestine
7 chr9:100070000-100100200 Weak transcription Fetal Heart heart
8 chr9:100070000-100131400 Weak transcription Fetal Kidney kidney
9 chr9:100070200-100092600 Weak transcription H1 Cell Line embryonic stem cell
10 chr9:100070200-100095000 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr9:100070400-100080600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr9:100070400-100083600 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr9:100070400-100091800 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr9:100070400-100092800 Weak transcription Colonic Mucosa Colon
15 chr9:100070400-100095200 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr9:100070600-100081800 Weak transcription Primary hematopoietic stem cells blood
17 chr9:100070600-100089600 Weak transcription Osteobl bone
18 chr9:100071000-100094400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr9:100071200-100093000 Strong transcription Stomach Smooth Muscle stomach
20 chr9:100071400-100083800 Strong transcription Fetal Muscle Trunk muscle
21 chr9:100071600-100079600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr9:100071600-100081000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr9:100071600-100081200 Strong transcription Fetal Brain Female brain
24 chr9:100071600-100081400 Strong transcription Skeletal Muscle Male skeletal muscle
25 chr9:100071600-100081600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr9:100071600-100084000 Strong transcription Fetal Muscle Leg muscle
27 chr9:100071600-100088800 Strong transcription Brain Germinal Matrix brain
28 chr9:100071600-100089200 Strong transcription Fetal Intestine Small intestine
29 chr9:100071600-100093000 Strong transcription Fetal Stomach stomach
30 chr9:100071600-100093400 Strong transcription Brain Anterior Caudate brain
31 chr9:100071600-100093800 Strong transcription Brain Inferior Temporal Lobe brain
32 chr9:100071600-100093800 Strong transcription Ovary ovary
33 chr9:100071600-100094600 Strong transcription Brain Angular Gyrus brain
34 chr9:100071800-100080400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr9:100071800-100081000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr9:100071800-100081400 Strong transcription Fetal Intestine Large intestine
37 chr9:100071800-100081600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr9:100071800-100083200 Strong transcription Right Ventricle heart
39 chr9:100071800-100084400 Strong transcription Aorta Aorta
40 chr9:100071800-100093400 Strong transcription Adipose Nuclei Adipose
41 chr9:100071800-100093600 Strong transcription Left Ventricle heart
42 chr9:100072000-100080800 Strong transcription Primary T cells fromperipheralblood blood
43 chr9:100072000-100081400 Strong transcription Brain Cingulate Gyrus brain
44 chr9:100072200-100081400 Strong transcription Spleen Spleen
45 chr9:100072400-100081000 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr9:100072400-100081200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr9:100072800-100079400 Weak transcription Hela-S3 cervix
48 chr9:100072800-100082200 Weak transcription Primary B cells from cord blood blood
49 chr9:100073000-100089200 Strong transcription Brain Hippocampus Middle brain
50 chr9:100073400-100080800 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015