Variant report

Variant	rs7855979
Chromosome Location	chr9:100158053-100158054
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs41281916	1.00[AMR][1000 genomes]
rs41281922	1.00[AMR][1000 genomes]
rs41281928	1.00[AMR][1000 genomes]
rs41281934	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6478124	1.00[AMR][1000 genomes]
rs7029224	1.00[AMR][1000 genomes]
rs7848156	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1036105	chr9:100131266-100171816	Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100149600-100161400	Weak transcription	Right Atrium	heart
2	chr9:100153000-100159200	Weak transcription	GM12878-XiMat	blood
3	chr9:100154000-100159000	Enhancers	HepG2	liver
4	chr9:100157400-100161800	Weak transcription	Thymus	Thymus
5	chr9:100157800-100162000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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