Variant report

Variant rs41282379
Chromosome Location chr4:85552882-85552883
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:85518600-85574800 Weak transcription Stomach Mucosa stomach
2 chr4:85520400-85559400 Weak transcription Fetal Heart heart
3 chr4:85525000-85564200 Weak transcription Placenta Placenta
4 chr4:85526800-85583000 Weak transcription Gastric stomach
5 chr4:85528400-85564000 Weak transcription Fetal Kidney kidney
6 chr4:85529400-85581600 Weak transcription Ovary ovary
7 chr4:85529600-85587600 Weak transcription Placenta Amnion Placenta Amnion
8 chr4:85532400-85556800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr4:85532400-85571200 Weak transcription Pancreas Pancrea
10 chr4:85536800-85556600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr4:85536800-85570200 Weak transcription Fetal Stomach stomach
12 chr4:85537200-85568600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr4:85538600-85568600 Weak transcription Brain Anterior Caudate brain
14 chr4:85539200-85560200 Weak transcription Left Ventricle heart
15 chr4:85540000-85562000 Weak transcription H1 Cell Line embryonic stem cell
16 chr4:85540400-85556000 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr4:85540800-85558000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr4:85541000-85557800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr4:85541000-85561800 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr4:85544200-85561600 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr4:85544400-85553000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr4:85544600-85560200 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr4:85544600-85564400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr4:85544600-85568000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr4:85544600-85572400 Weak transcription Brain Cingulate Gyrus brain
26 chr4:85545200-85576400 Weak transcription Esophagus oesophagus
27 chr4:85546600-85570400 Weak transcription Small Intestine intestine
28 chr4:85547000-85562400 Weak transcription Duodenum Mucosa Duodenum
29 chr4:85547400-85556800 Weak transcription Fetal Intestine Small intestine
30 chr4:85548200-85558200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr4:85550200-85557000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr4:85551400-85554000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr4:85552000-85553000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr4:85552000-85557000 Weak transcription Fetal Intestine Large intestine
35 chr4:85552600-85554000 Enhancers Osteobl bone
36 chr4:85552600-85554200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr4:85552600-85554200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr4:85552800-85553000 Enhancers HMEC breast
39 chr4:85552800-85553200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr4:85552800-85553400 Flanking Active TSS NHEK skin
41 chr4:85552800-85553800 Enhancers HSMM muscle
42 chr4:85552800-85554000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr4:85552800-85554000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr4:85552800-85554200 Enhancers Muscle Satellite Cultured Cells --

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