The 2.0 version of rSNPBase

Variant report

Variant rs41285328
Chromosome Location chr6:131230203-131230204
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131191000-131234400 Weak transcription Esophagus oesophagus
2 chr6:131191200-131233000 Weak transcription Spleen Spleen
3 chr6:131203600-131234200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr6:131209000-131234000 Weak transcription Fetal Thymus thymus
5 chr6:131211200-131234000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr6:131211400-131234200 Weak transcription Primary hematopoietic stem cells blood
7 chr6:131213600-131232200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr6:131215200-131234000 Weak transcription Primary T cells from cord blood blood
9 chr6:131215200-131234200 Weak transcription Thymus Thymus
10 chr6:131215400-131238200 Weak transcription Aorta Aorta
11 chr6:131215600-131233800 Weak transcription Pancreas Pancrea
12 chr6:131216600-131233800 Weak transcription Ovary ovary
13 chr6:131220600-131281200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr6:131222200-131230400 Weak transcription H9 Cell Line embryonic stem cell
15 chr6:131222200-131234000 Weak transcription Primary B cells from peripheral blood blood
16 chr6:131222200-131234200 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr6:131222200-131234400 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr6:131222200-131236400 Weak transcription Fetal Lung lung
19 chr6:131222200-131248400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr6:131222200-131251800 Weak transcription Primary B cells from cord blood blood
21 chr6:131222400-131232800 Weak transcription Rectal Smooth Muscle rectum
22 chr6:131222400-131233200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr6:131222400-131233200 Weak transcription HSMMtube muscle
24 chr6:131222400-131233800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr6:131222400-131238200 Weak transcription Dnd41 blood
26 chr6:131222400-131248600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr6:131222600-131241200 Weak transcription A549 lung
28 chr6:131223600-131233600 Weak transcription Lung lung
29 chr6:131224200-131233000 Weak transcription Fetal Muscle Trunk muscle
30 chr6:131224400-131233600 Weak transcription Fetal Stomach stomach
31 chr6:131224400-131241600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr6:131226800-131230600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr6:131227400-131230600 Enhancers NHDF-Ad bronchial
34 chr6:131227800-131230400 Enhancers GM12878-XiMat blood
35 chr6:131227800-131230600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:131228600-131233600 Weak transcription Muscle Satellite Cultured Cells --
37 chr6:131228800-131233000 Weak transcription HSMM muscle
38 chr6:131228800-131245800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr6:131229400-131234200 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr6:131229400-131234400 Weak transcription Duodenum Mucosa Duodenum
41 chr6:131229400-131245200 Weak transcription Adipose Nuclei Adipose
42 chr6:131229600-131233000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr6:131229600-131233000 Weak transcription Brain Angular Gyrus brain
44 chr6:131229600-131233000 Weak transcription Brain Anterior Caudate brain
45 chr6:131229600-131233000 Weak transcription Brain Cingulate Gyrus brain
46 chr6:131229600-131233000 Weak transcription Brain Hippocampus Middle brain
47 chr6:131229600-131233000 Weak transcription Left Ventricle heart
48 chr6:131229600-131234400 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr6:131229600-131234400 Weak transcription Small Intestine intestine
50 chr6:131229600-131245400 Weak transcription NHLF lung

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Last update: Aug 31, 2015