The 2.0 version of rSNPBase

Variant report

Variant rs41300021
Chromosome Location chr1:213057409-213057410
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
2 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
3 chr1:213032800-213057800 Weak transcription Placenta Placenta
4 chr1:213032800-213061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:213032800-213062000 Weak transcription Psoas Muscle Psoas
6 chr1:213033600-213062000 Weak transcription Thymus Thymus
7 chr1:213034400-213058000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:213034400-213068000 Weak transcription Colon Smooth Muscle Colon
9 chr1:213034600-213061800 Weak transcription Fetal Heart heart
10 chr1:213034600-213067800 Weak transcription NHLF lung
11 chr1:213034600-213070600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:213035800-213073000 Weak transcription Small Intestine intestine
13 chr1:213036000-213070800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:213036200-213062000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:213036400-213062000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr1:213037600-213073200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:213038400-213072000 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr1:213039600-213073000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:213040400-213073000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:213043200-213062000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:213043200-213073400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr1:213044400-213063200 Weak transcription Placenta Amnion Placenta Amnion
23 chr1:213045000-213070800 Weak transcription Pancreas Pancrea
24 chr1:213046600-213066400 Strong transcription Primary monocytes fromperipheralblood blood
25 chr1:213047000-213073600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr1:213047200-213059600 Weak transcription Brain Angular Gyrus brain
27 chr1:213047200-213061800 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:213047200-213062000 Weak transcription Brain Cingulate Gyrus brain
29 chr1:213047400-213059200 Weak transcription HUVEC blood vessel
30 chr1:213048800-213062600 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr1:213049000-213058000 Weak transcription Osteobl bone
32 chr1:213049000-213059200 Weak transcription Stomach Smooth Muscle stomach
33 chr1:213049000-213061800 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr1:213049000-213073000 Weak transcription HSMMtube muscle
35 chr1:213049400-213063200 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr1:213049600-213058000 Weak transcription A549 lung
37 chr1:213049600-213059600 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr1:213049600-213062000 Weak transcription Rectal Smooth Muscle rectum
39 chr1:213049800-213059400 Weak transcription Primary T cells from cord blood blood
40 chr1:213049800-213059600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:213049800-213061800 Weak transcription Ovary ovary
42 chr1:213049800-213062000 Weak transcription Gastric stomach
43 chr1:213049800-213062600 Weak transcription NHEK skin
44 chr1:213049800-213072400 Weak transcription Fetal Brain Male brain
45 chr1:213049800-213073200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:213049800-213073200 Weak transcription Spleen Spleen
47 chr1:213050000-213065000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr1:213050800-213065800 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr1:213051200-213064400 Strong transcription Hela-S3 cervix
50 chr1:213051600-213060600 Weak transcription NH-A brain

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Last update: Aug 31, 2015