The 2.0 version of rSNPBase

Variant report

Variant rs57638446
Chromosome Location chr1:213064770-213064771
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
2 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
3 chr1:213034400-213068000 Weak transcription Colon Smooth Muscle Colon
4 chr1:213034600-213067800 Weak transcription NHLF lung
5 chr1:213034600-213070600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:213035800-213073000 Weak transcription Small Intestine intestine
7 chr1:213036000-213070800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:213037600-213073200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr1:213038400-213072000 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr1:213039600-213073000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:213040400-213073000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:213043200-213073400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr1:213045000-213070800 Weak transcription Pancreas Pancrea
14 chr1:213046600-213066400 Strong transcription Primary monocytes fromperipheralblood blood
15 chr1:213047000-213073600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:213049000-213073000 Weak transcription HSMMtube muscle
17 chr1:213049800-213072400 Weak transcription Fetal Brain Male brain
18 chr1:213049800-213073200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:213049800-213073200 Weak transcription Spleen Spleen
20 chr1:213050000-213065000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:213050800-213065800 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr1:213052200-213073000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:213052600-213066000 Strong transcription HepG2 liver
24 chr1:213052800-213073400 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:213053200-213066200 Strong transcription Dnd41 blood
26 chr1:213053400-213073800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:213053600-213073000 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr1:213053800-213073200 Strong transcription HUES48 Cell Line embryonic stem cell
29 chr1:213053800-213073200 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr1:213054000-213071000 Strong transcription iPS-20b Cell Line embryonic stem cell
31 chr1:213054200-213071400 Strong transcription iPS-18 Cell Line embryonic stem cell
32 chr1:213054400-213073200 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr1:213055000-213073600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:213055200-213065600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr1:213055200-213066400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:213055200-213073200 Strong transcription H1 Cell Line embryonic stem cell
37 chr1:213055800-213066600 Strong transcription H9 Cell Line embryonic stem cell
38 chr1:213056000-213071200 Strong transcription Primary B cells from peripheral blood blood
39 chr1:213056000-213072200 Strong transcription ES-I3 Cell Line embryonic stem cell
40 chr1:213056200-213066200 Strong transcription Duodenum Smooth Muscle Duodenum
41 chr1:213056200-213072000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:213056200-213074200 Strong transcription Duodenum Mucosa Duodenum
43 chr1:213056400-213066400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:213056400-213068000 Strong transcription Fetal Muscle Trunk muscle
45 chr1:213056400-213070000 Strong transcription K562 blood
46 chr1:213056400-213073400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:213056600-213066200 Strong transcription Adipose Nuclei Adipose
48 chr1:213056600-213066200 Strong transcription Liver Liver
49 chr1:213056600-213066600 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr1:213056600-213073600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015