The 2.0 version of rSNPBase

Variant report

Variant rs41303275
Chromosome Location chr1:211519576-211519577
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211505000-211530200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:211505800-211529800 Weak transcription Ovary ovary
3 chr1:211509800-211521600 Enhancers Primary T helper cells fromperipheralblood blood
4 chr1:211509800-211529200 Weak transcription Rectal Smooth Muscle rectum
5 chr1:211509800-211544200 Weak transcription HUVEC blood vessel
6 chr1:211510400-211520800 Enhancers Primary T killer memory cells from peripheral blood blood
7 chr1:211510600-211555400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:211510800-211524000 Genic enhancers Primary B cells from peripheral blood blood
9 chr1:211511400-211528600 Weak transcription Right Atrium heart
10 chr1:211511600-211533000 Weak transcription Left Ventricle heart
11 chr1:211512200-211521600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:211513200-211520800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr1:211513200-211526600 Weak transcription Stomach Smooth Muscle stomach
14 chr1:211513400-211524800 Weak transcription A549 lung
15 chr1:211513400-211527000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:211513400-211528800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:211513600-211520200 Weak transcription HSMMtube muscle
18 chr1:211514400-211526600 Weak transcription Fetal Muscle Trunk muscle
19 chr1:211514600-211521800 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr1:211514800-211527000 Weak transcription Aorta Aorta
21 chr1:211514800-211552200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:211515000-211526400 Weak transcription Duodenum Mucosa Duodenum
23 chr1:211515000-211527000 Weak transcription Adipose Nuclei Adipose
24 chr1:211515000-211555000 Weak transcription Hela-S3 cervix
25 chr1:211515000-211555800 Weak transcription Esophagus oesophagus
26 chr1:211515200-211520400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:211515200-211543200 Weak transcription Colonic Mucosa Colon
28 chr1:211515400-211548400 Weak transcription Stomach Mucosa stomach
29 chr1:211516400-211520000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr1:211516400-211520800 Genic enhancers Primary T cells fromperipheralblood blood
31 chr1:211516600-211519800 Strong transcription Fetal Stomach stomach
32 chr1:211517200-211519800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
33 chr1:211517200-211520000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:211517200-211523000 Weak transcription Thymus Thymus
35 chr1:211517400-211519800 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr1:211517400-211520000 Genic enhancers Primary T cells from cord blood blood
37 chr1:211517400-211521400 Genic enhancers Primary B cells from cord blood blood
38 chr1:211517400-211521600 Enhancers Primary T helper cells PMA-I stimulated --
39 chr1:211517600-211525000 Weak transcription Fetal Muscle Leg muscle
40 chr1:211517800-211519600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr1:211517800-211520800 Weak transcription GM12878-XiMat blood
42 chr1:211518000-211522800 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr1:211518000-211525200 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr1:211518000-211526400 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:211518000-211526400 Weak transcription Spleen Spleen
46 chr1:211518000-211527000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:211518200-211519800 Strong transcription Fetal Intestine Small intestine
48 chr1:211518200-211520800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
49 chr1:211518200-211525200 Weak transcription Fetal Thymus thymus
50 chr1:211518400-211520200 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015