Variant report

Variant rs4141060
Chromosome Location chr3:50300117-50300118
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50284800-50300600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr3:50298200-50303400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:50298200-50304400 Enhancers Ovary ovary
4 chr3:50298400-50300200 Enhancers Right Ventricle heart
5 chr3:50298400-50301600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr3:50298400-50301800 Weak transcription Aorta Aorta
7 chr3:50298400-50303000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr3:50298600-50300400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr3:50298600-50300400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr3:50298600-50301600 Weak transcription HMEC breast
11 chr3:50298600-50301800 Weak transcription NHEK skin
12 chr3:50298600-50302000 Weak transcription Small Intestine intestine
13 chr3:50298800-50300400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr3:50298800-50300600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr3:50298800-50300600 Enhancers Skeletal Muscle Female skeletal muscle
16 chr3:50298800-50301000 Weak transcription H9 Cell Line embryonic stem cell
17 chr3:50298800-50301000 Weak transcription NHDF-Ad bronchial
18 chr3:50298800-50301200 Weak transcription K562 blood
19 chr3:50298800-50301600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr3:50298800-50301600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr3:50298800-50301600 Weak transcription Gastric stomach
22 chr3:50298800-50301800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr3:50298800-50302000 Weak transcription HUVEC blood vessel
24 chr3:50298800-50302400 Weak transcription Fetal Thymus thymus
25 chr3:50298800-50302800 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr3:50298800-50303200 Enhancers Brain Anterior Caudate brain
27 chr3:50298800-50303800 Enhancers Brain Substantia Nigra brain
28 chr3:50299000-50300200 Enhancers Brain Angular Gyrus brain
29 chr3:50299000-50300800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr3:50299000-50300800 Weak transcription Placenta Placenta
31 chr3:50299000-50301000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr3:50299000-50301000 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr3:50299000-50301000 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr3:50299000-50301000 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr3:50299000-50301000 Weak transcription A549 lung
36 chr3:50299000-50301400 Weak transcription Fetal Intestine Large intestine
37 chr3:50299000-50301600 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr3:50299000-50301600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr3:50299000-50301600 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr3:50299000-50301600 Weak transcription Stomach Mucosa stomach
41 chr3:50299000-50301800 Weak transcription Fetal Kidney kidney
42 chr3:50299000-50302400 Weak transcription Psoas Muscle Psoas
43 chr3:50299000-50302600 Enhancers Brain Hippocampus Middle brain
44 chr3:50299000-50302600 Enhancers Brain Inferior Temporal Lobe brain
45 chr3:50299000-50303600 Enhancers Brain Cingulate Gyrus brain
46 chr3:50299000-50304400 Weak transcription Liver Liver
47 chr3:50299200-50300200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr3:50299200-50300200 Weak transcription Brain Germinal Matrix brain
49 chr3:50299200-50300400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr3:50299200-50300600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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