The 2.0 version of rSNPBase

Variant report

Variant rs4143190
Chromosome Location chr12:82743164-82743165
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:82735400-82745200 Weak transcription Brain Cingulate Gyrus brain
2 chr12:82736800-82745000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr12:82738400-82745200 Weak transcription Primary hematopoietic stem cells blood
4 chr12:82739600-82744000 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr12:82739600-82744000 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr12:82739600-82745000 Weak transcription Ovary ovary
7 chr12:82739800-82744600 Weak transcription Brain Anterior Caudate brain
8 chr12:82740000-82744000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr12:82740000-82746000 Weak transcription Fetal Lung lung
10 chr12:82740200-82743400 Weak transcription Primary T cells fromperipheralblood blood
11 chr12:82740200-82743400 Weak transcription Brain Inferior Temporal Lobe brain
12 chr12:82740200-82743400 Weak transcription Fetal Muscle Trunk muscle
13 chr12:82740200-82744000 Weak transcription Fetal Muscle Leg muscle
14 chr12:82740200-82744000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr12:82740200-82745000 Weak transcription A549 lung
16 chr12:82740200-82745200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr12:82740200-82745200 Weak transcription HSMM muscle
18 chr12:82740200-82745400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr12:82740200-82751600 Weak transcription Gastric stomach
20 chr12:82740800-82745000 Weak transcription Fetal Stomach stomach
21 chr12:82740800-82750000 Weak transcription Fetal Intestine Small intestine
22 chr12:82740800-82750000 Weak transcription Psoas Muscle Psoas
23 chr12:82741000-82745200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr12:82741000-82749400 Weak transcription Fetal Brain Male brain
25 chr12:82741200-82743400 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr12:82741200-82744200 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr12:82741200-82745000 Weak transcription Fetal Intestine Large intestine
28 chr12:82741200-82745000 Weak transcription Thymus Thymus
29 chr12:82741200-82751000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr12:82741400-82744000 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr12:82741400-82747000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr12:82741400-82749400 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr12:82741600-82749200 Strong transcription Adipose Nuclei Adipose
34 chr12:82741600-82749800 Strong transcription Primary T cells from cord blood blood
35 chr12:82741800-82744000 Weak transcription Fetal Brain Female brain
36 chr12:82741800-82745000 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr12:82741800-82745200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr12:82741800-82747800 Strong transcription Brain Hippocampus Middle brain
39 chr12:82742000-82743600 Weak transcription Primary B cells from peripheral blood blood
40 chr12:82742000-82743600 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr12:82742000-82743800 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr12:82742000-82744400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr12:82742000-82745000 Weak transcription Fetal Kidney kidney
44 chr12:82742000-82745000 Weak transcription GM12878-XiMat blood
45 chr12:82742000-82745200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr12:82742000-82745200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr12:82742000-82745200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr12:82742000-82749400 Strong transcription Liver Liver
49 chr12:82742000-82750000 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr12:82742200-82743600 Strong transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015