Variant report

Variant	rs8181705
Chromosome Location	chr12:82753646-82753647
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr12:82753540-82753690	AG04450	lung:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
2	CTCF	chr12:82753566-82753739	HUVEC	blood vessel:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
3	CTCF	chr12:82753600-82753966	K562	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
4	CTCF	chr12:82753540-82753690	HPF	lung:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
5	CTCF	chr12:82753580-82753730	AG09319	gingival:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
6	CTCF	chr12:82753540-82753690	HPAF	blood vessel:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
7	CTCF	chr12:82753580-82753730	AoAF	blood vessel:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
8	CTCF	chr12:82753580-82753730	HCPEpiC	choroid plexus:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
9	CTCF	chr12:82753459-82753818	GM12878	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
10	CTCF	chr12:82753571-82753700	GM13977	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
11	RAD21	chr12:82753469-82753724	GM12878	blood:	n/a	n/a
12	CTCF	chr12:82753520-82753670	HMEC	breast:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
13	CTCF	chr12:82753540-82753690	HRE	kidney:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
14	CTCF	chr12:82753640-82753790	HMEC	breast:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
15	CTCF	chr12:82753580-82753730	HA-sp	spinal cord:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
16	CTCF	chr12:82753560-82753710	GM12873	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
17	CTCF	chr12:82753580-82753730	RPTEC	kidney:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
18	CTCF	chr12:82753580-82753730	AG10803	skin:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
19	CTCF	chr12:82753520-82753670	AG04449	skin:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
20	CTCF	chr12:82753540-82753690	AG04449	skin:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
21	CTCF	chr12:82753626-82753692	LNCaP	prostate:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
22	CTCF	chr12:82753560-82753710	HCM	heart:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
23	CTCF	chr12:82753580-82753730	GM06990	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
24	CTCF	chr12:82753520-82753670	AoAF	blood vessel:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
25	CTCF	chr12:82753620-82753770	HL-60	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
26	CTCF	chr12:82753620-82753770	AG10803	skin:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
27	CTCF	chr12:82753594-82753709	Hela-S3	cervix:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
28	CTCF	chr12:82753560-82753710	GM12874	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
29	CTCF	chr12:82753500-82753650	AG09309	skin:	n/a	n/a
30	CTCF	chr12:82753540-82753690	NHDF-neo	bronchial:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
31	CTCF	chr12:82753580-82753730	HFF	foreskin:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
32	CTCF	chr12:82753520-82753670	HBMEC	blood vessel:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
33	CTCF	chr12:82753576-82753696	LNCaP	prostate:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
34	CTCF	chr12:82753600-82753750	NHLF	lung:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
35	CTCF	chr12:82753560-82753710	AG09319	gingival:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
36	CTCF	chr12:82753540-82753690	HUVEC	blood vessel:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
37	CTCF	chr12:82753640-82753790	BJ	skin:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
38	CTCF	chr12:82753520-82753670	GM12871	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
39	CTCF	chr12:82753560-82753710	HRE	kidney:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
40	CTCF	chr12:82753540-82753690	HRPEpiC	eye:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
41	CTCF	chr12:82753560-82753710	MCF-7	breast:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
42	CTCF	chr12:82753580-82753730	HCFaa	heart:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
43	CTCF	chr12:82753580-82753695	GM10266	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
44	CTCF	chr12:82753560-82753710	HMF	breast:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
45	CTCF	chr12:82753520-82753670	HCPEpiC	choroid plexus:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
46	CTCF	chr12:82753578-82753713	GM10248	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
47	CTCF	chr12:82753520-82753670	GM12872	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
48	CTCF	chr12:82753540-82753690	GM12878	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666
49	CTCF	chr12:82750976-82754265	A549	lung:	n/a	chr12:82752664-82752682 chr12:82752667-82752677 chr12:82752861-82752869 chr12:82752670-82752679 chr12:82753648-82753656 chr12:82752666-82752679 chr12:82753645-82753666
50	CTCF	chr12:82753587-82753707	GM13976	blood:	n/a	chr12:82753648-82753656 chr12:82753645-82753666

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:82753358..82755104-chr12:82772991..82774509,2	K562	blood:
2	chr12:82753521..82754075-chr12:83021392..83022207,3	MCF-7	breast:

Variant related genes	Relation type
CCDC59	TF binding region

Extended variants
information (count: 124 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:116)

rs_ID	r²[population]
rs10219540	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10431469	0.90[YRI][hapmap];0.84[EUR][1000 genomes]
rs10732677	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10735451	0.84[EUR][1000 genomes]
rs10735454	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10735455	1.00[CEU][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10746241	0.82[YRI][hapmap];0.84[EUR][1000 genomes]
rs10746243	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10746247	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10746248	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10746250	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10746251	0.84[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs10778891	0.84[EUR][1000 genomes]
rs10778894	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10778897	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10778903	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10778904	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10778905	1.00[CEU][hapmap];0.94[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10778906	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10778908	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs10862481	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10862484	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10862485	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10862486	1.00[CEU][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17009470	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17009622	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs17719033	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs17775000	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs17775447	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs17775501	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs1874058	1.00[CEU][hapmap];0.89[YRI][hapmap];0.85[EUR][1000 genomes]
rs2068633	0.88[YRI][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2254688	1.00[CEU][hapmap];0.90[YRI][hapmap];0.94[EUR][1000 genomes]
rs2401026	1.00[CEU][hapmap];0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2401027	1.00[CEU][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2401032	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2401039	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2642015	1.00[CEU][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2642017	0.94[EUR][1000 genomes]
rs2642018	1.00[CEU][hapmap];0.95[YRI][hapmap];0.94[EUR][1000 genomes]
rs2642019	1.00[CEU][hapmap];0.95[YRI][hapmap];0.94[EUR][1000 genomes]
rs2642021	0.88[EUR][1000 genomes]
rs2642023	1.00[CEU][hapmap];0.95[YRI][hapmap];0.88[EUR][1000 genomes]
rs2717449	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs2717459	1.00[CEU][hapmap];1.00[YRI][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2731286	1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2731288	0.88[EUR][1000 genomes]
rs2731289	1.00[CEU][hapmap];0.86[YRI][hapmap];0.88[EUR][1000 genomes]
rs2731290	1.00[CEU][hapmap];0.94[YRI][hapmap];0.88[EUR][1000 genomes]
rs2731291	1.00[CEU][hapmap];0.94[YRI][hapmap];0.88[EUR][1000 genomes]
rs2731292	1.00[CEU][hapmap];0.95[YRI][hapmap];0.88[EUR][1000 genomes]
rs2731294	0.88[EUR][1000 genomes]
rs2731295	1.00[CEU][hapmap];0.94[YRI][hapmap];0.88[EUR][1000 genomes]
rs2731297	0.91[EUR][1000 genomes]
rs28626834	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2895910	1.00[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2895911	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2895912	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2895913	0.83[AFR][1000 genomes]
rs2895915	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4143187	1.00[CEU][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4143190	0.84[EUR][1000 genomes]
rs41535250	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs4242864	1.00[CEU][hapmap];0.89[YRI][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4242870	0.94[YRI][hapmap];0.84[EUR][1000 genomes]
rs4257045	1.00[CEU][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4284465	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4296098	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4334093	1.00[CEU][hapmap];0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4343090	1.00[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4356298	1.00[CEU][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4370996	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4387422	1.00[CEU][hapmap];1.00[YRI][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4399377	1.00[CEU][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4411333	0.85[YRI][hapmap]
rs4417379	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4460874	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4471506	0.84[EUR][1000 genomes]
rs4483662	0.84[EUR][1000 genomes]
rs4505128	1.00[CEU][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4516038	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4517594	1.00[CEU][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4540892	1.00[CEU][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4553425	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4587790	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4628747	1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4882379	1.00[CEU][hapmap];0.94[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4882386	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4882389	1.00[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4882390	1.00[CEU][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4882435	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4882438	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4882442	0.93[AFR][1000 genomes]
rs4882541	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4882542	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs55806388	0.88[EUR][1000 genomes]
rs55887136	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs56337649	0.94[EUR][1000 genomes]
rs6539666	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs6539669	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7294771	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7294903	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7297164	1.00[CEU][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7299307	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7299616	1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7309442	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7313975	1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7315834	0.88[YRI][hapmap];0.84[EUR][1000 genomes]
rs7316500	1.00[CEU][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7953234	0.88[EUR][1000 genomes]
rs7954119	0.85[YRI][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7954460	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7969953	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs7977443	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs8181688	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9804714	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv559539	chr12:82280797-82896218	Genic enhancers Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1041954	chr12:82314981-83008609	Enhancers Active TSS Genic enhancers Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
3	nsv541550	chr12:82314981-83008609	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
4	nsv832471	chr12:82578953-82755360	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
5	nsv1053093	chr12:82645292-83287809	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
6	nsv541551	chr12:82645292-83287809	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
7	nsv559541	chr12:82715210-83108395	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
8	nsv899348	chr12:82744187-83169297	Enhancers Strong transcription Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:99 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:82751000-82753800	Active TSS	Right Atrium	heart
2	chr12:82751200-82754600	Active TSS	GM12878-XiMat	blood
3	chr12:82751400-82753800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr12:82752800-82753800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
5	chr12:82752800-82753800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr12:82752800-82753800	Flanking Active TSS	Adipose Nuclei	Adipose
7	chr12:82752800-82753800	Flanking Active TSS	Fetal Lung	lung
8	chr12:82753000-82753800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr12:82753000-82753800	Flanking Active TSS	Brain Hippocampus Middle	brain
10	chr12:82753000-82753800	Flanking Active TSS	Fetal Heart	heart
11	chr12:82753000-82753800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
12	chr12:82753000-82753800	Flanking Active TSS	Dnd41	blood
13	chr12:82753000-82754000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr12:82753000-82754000	Flanking Active TSS	Stomach Smooth Muscle	stomach
15	chr12:82753200-82753800	Enhancers	Primary B cells from peripheral blood	blood
16	chr12:82753200-82753800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
17	chr12:82753200-82754000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr12:82753200-82754000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
19	chr12:82753200-82754200	Enhancers	Primary neutrophils fromperipheralblood	blood
20	chr12:82753200-82754400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
21	chr12:82753200-82754600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
22	chr12:82753200-82754800	Weak transcription	Pancreas	Pancrea
23	chr12:82753200-82755400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr12:82753200-82755400	Weak transcription	Gastric	stomach
25	chr12:82753200-82755400	Weak transcription	Spleen	Spleen
26	chr12:82753200-82756000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr12:82753200-82767200	Weak transcription	Aorta	Aorta
28	chr12:82753200-82767800	Weak transcription	Esophagus	oesophagus
29	chr12:82753200-82767800	Weak transcription	Lung	lung
30	chr12:82753400-82753800	Enhancers	HUES64 Cell Line	embryonic stem cell
31	chr12:82753400-82753800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr12:82753400-82753800	Enhancers	Primary T cells from cord blood	blood
33	chr12:82753400-82753800	Enhancers	Fetal Brain Female	brain
34	chr12:82753400-82753800	Active TSS	Rectal Mucosa Donor 29	rectum
35	chr12:82753400-82753800	Enhancers	Rectal Mucosa Donor 31	rectum
36	chr12:82753400-82753800	Enhancers	Stomach Mucosa	stomach
37	chr12:82753400-82753800	Enhancers	NHEK	skin
38	chr12:82753400-82753800	Enhancers	Osteobl	bone
39	chr12:82753400-82754000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
40	chr12:82753400-82754200	Enhancers	Primary T helper cells PMA-I stimulated	--
41	chr12:82753400-82754200	Enhancers	Cortex derived primary cultured neurospheres	brain
42	chr12:82753400-82754400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
43	chr12:82753400-82754400	Enhancers	Primary T helper cells fromperipheralblood	blood
44	chr12:82753400-82754400	Enhancers	Primary T killer memory cells from peripheral blood	blood
45	chr12:82753400-82754600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
46	chr12:82753400-82754600	Weak transcription	Ovary	ovary
47	chr12:82753400-82755400	Weak transcription	Hela-S3	cervix
48	chr12:82753400-82755800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
49	chr12:82753400-82756800	Weak transcription	H1 Cell Line	embryonic stem cell
50	chr12:82753400-82756800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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