Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:36585356..36589056-chr11:36590125..36594232,4	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11033760	0.83[ASN][1000 genomes]
rs11033761	0.83[ASN][1000 genomes]
rs11821147	0.83[ASN][1000 genomes]
rs11827933	0.83[ASN][1000 genomes]
rs12271707	0.83[ASN][1000 genomes]
rs12293177	0.83[ASN][1000 genomes]
rs12294817	0.83[ASN][1000 genomes]
rs12421514	1.00[JPT][hapmap]
rs16929126	1.00[JPT][hapmap]
rs16929138	1.00[JPT][hapmap]
rs16929326	0.83[ASN][1000 genomes]
rs16929333	0.83[ASN][1000 genomes]
rs16929339	0.83[ASN][1000 genomes]
rs2458930	1.00[JPT][hapmap]
rs4150997	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4151016	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4151019	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4151032	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4151041	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4151042	1.00[ASN][1000 genomes]
rs4151046	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs60156568	0.83[ASN][1000 genomes]
rs7130097	1.00[JPT][hapmap]
rs869207	1.00[JPT][hapmap]
rs871912	1.00[JPT][hapmap]
rs955772	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv832123	chr11:36582872-36757443	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36586400-36595200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr11:36586600-36595000	Weak transcription	Left Ventricle	heart
3	chr11:36586600-36595200	Weak transcription	Right Ventricle	heart
4	chr11:36586800-36599400	Weak transcription	Liver	Liver
5	chr11:36586800-36600200	Weak transcription	Stomach Smooth Muscle	stomach
6	chr11:36587000-36589400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr11:36587000-36590800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr11:36587000-36595000	Weak transcription	Pancreas	Pancrea
9	chr11:36587200-36589400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr11:36587200-36595000	Weak transcription	Spleen	Spleen
11	chr11:36587200-36595200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr11:36587400-36594800	Active TSS	Thymus	Thymus
13	chr11:36587800-36589600	Flanking Active TSS	Dnd41	blood
14	chr11:36588800-36589200	Active TSS	Fetal Thymus	thymus

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