Variant report

rSNPs within LD-proxies of this variant (count:18)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv832123	chr11:36582872-36757443	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36586800-36600200	Weak transcription	Stomach Smooth Muscle	stomach
2	chr11:36589800-36600800	Transcr. at gene 5' and 3'	Dnd41	blood
3	chr11:36593200-36600800	Transcr. at gene 5' and 3'	Fetal Thymus	thymus
4	chr11:36595800-36600400	Weak transcription	Aorta	Aorta
5	chr11:36596400-36602400	Weak transcription	Pancreas	Pancrea
6	chr11:36596600-36603000	Weak transcription	Left Ventricle	heart
7	chr11:36597000-36602600	Weak transcription	Fetal Intestine Small	intestine
8	chr11:36598000-36600800	Enhancers	Fetal Heart	heart
9	chr11:36598200-36600400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr11:36598600-36600600	Enhancers	HSMMtube	muscle
11	chr11:36598600-36600600	Enhancers	NH-A	brain
12	chr11:36598800-36600000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr11:36598800-36600600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr11:36598800-36600600	Enhancers	Rectal Smooth Muscle	rectum
15	chr11:36598800-36600600	Enhancers	HSMM	muscle
16	chr11:36599000-36599600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr11:36599000-36600200	Enhancers	NHDF-Ad	bronchial
18	chr11:36599000-36600400	Enhancers	Brain Germinal Matrix	brain
19	chr11:36599200-36600200	Enhancers	Fetal Brain Male	brain
20	chr11:36599200-36600600	Enhancers	Osteobl	bone
21	chr11:36599400-36599800	Transcr. at gene 5' and 3'	Thymus	Thymus
22	chr11:36599400-36600400	Enhancers	Colon Smooth Muscle	Colon

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