Variant report

Variant rs41555414
Chromosome Location chr6:31237040-31237041
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31233200-31238200 Weak transcription Stomach Mucosa stomach
2 chr6:31233200-31238400 Weak transcription Small Intestine intestine
3 chr6:31234800-31237400 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr6:31235000-31238600 Weak transcription HSMM muscle
5 chr6:31235200-31238400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr6:31235400-31237400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr6:31235400-31237800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr6:31235600-31237200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr6:31235600-31237200 Genic enhancers Rectal Mucosa Donor 29 rectum
10 chr6:31235600-31237400 Strong transcription Primary hematopoietic stem cells blood
11 chr6:31235600-31237400 Strong transcription Left Ventricle heart
12 chr6:31235600-31238200 Strong transcription H1 Cell Line embryonic stem cell
13 chr6:31235600-31238400 Genic enhancers Spleen Spleen
14 chr6:31235600-31238400 Weak transcription NH-A brain
15 chr6:31235600-31238800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr6:31235600-31238800 Weak transcription Fetal Kidney kidney
17 chr6:31235800-31237200 Strong transcription Placenta Placenta
18 chr6:31235800-31237200 Strong transcription Fetal Thymus thymus
19 chr6:31235800-31237200 Strong transcription Gastric stomach
20 chr6:31235800-31237400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr6:31235800-31237400 Strong transcription Esophagus oesophagus
22 chr6:31235800-31237600 Strong transcription NHLF lung
23 chr6:31235800-31238000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr6:31235800-31238000 Genic enhancers Primary B cells from peripheral blood blood
25 chr6:31235800-31238200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr6:31235800-31238400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr6:31235800-31238400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr6:31235800-31238400 Weak transcription Brain Substantia Nigra brain
29 chr6:31235800-31238400 Strong transcription Thymus Thymus
30 chr6:31235800-31238600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr6:31235800-31238600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr6:31235800-31238600 Weak transcription Fetal Lung lung
33 chr6:31236000-31238200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr6:31236000-31238200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr6:31236000-31238200 Strong transcription Fetal Muscle Leg muscle
36 chr6:31236000-31238600 Strong transcription Fetal Intestine Small intestine
37 chr6:31236000-31238600 Weak transcription HSMMtube muscle
38 chr6:31236200-31237200 Strong transcription Pancreas Pancrea
39 chr6:31236200-31237400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr6:31236200-31237600 Strong transcription Brain Anterior Caudate brain
41 chr6:31236200-31237600 Strong transcription Brain Hippocampus Middle brain
42 chr6:31236200-31237600 Strong transcription Lung lung
43 chr6:31236200-31237800 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr6:31236200-31237800 Strong transcription Aorta Aorta
45 chr6:31236200-31237800 Strong transcription Placenta Amnion Placenta Amnion
46 chr6:31236200-31238000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr6:31236200-31238400 Strong transcription Fetal Adrenal Gland Adrenal Gland
48 chr6:31236200-31238600 Strong transcription H9 Cell Line embryonic stem cell
49 chr6:31236200-31238600 Weak transcription Brain Angular Gyrus brain
50 chr6:31236200-31238800 Transcr. at gene 5' and 3' Primary B cells from cord blood blood

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