Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10225453	0.86[ASN][1000 genomes]
rs10266755	0.92[ASN][1000 genomes]
rs10274689	0.82[ASN][1000 genomes]
rs12669167	0.86[ASN][1000 genomes]
rs13231854	0.92[ASN][1000 genomes]
rs17142995	0.81[ASN][1000 genomes]
rs2107275	0.92[ASN][1000 genomes]
rs3735467	0.92[ASN][1000 genomes]
rs3823859	0.82[ASN][1000 genomes]
rs3823861	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs41619	0.85[EUR][1000 genomes]
rs41620	0.83[EUR][1000 genomes]
rs41621	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs41624	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs41627	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs41628	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs41629	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs41632	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4445165	0.91[ASN][1000 genomes]
rs55855220	0.86[ASN][1000 genomes]
rs6466759	0.86[ASN][1000 genomes]
rs6466760	0.84[ASN][1000 genomes]
rs6466761	0.85[ASN][1000 genomes]
rs6466762	0.82[ASN][1000 genomes]
rs6953454	0.86[ASN][1000 genomes]
rs6958947	0.80[ASN][1000 genomes]
rs6959328	0.86[ASN][1000 genomes]
rs6961583	0.88[ASN][1000 genomes]
rs6964667	0.84[ASN][1000 genomes]
rs6964786	0.86[ASN][1000 genomes]
rs7781985	0.80[ASN][1000 genomes]
rs7805211	0.85[ASN][1000 genomes]
rs996903	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1818826	chr7:120405335-120622836	Strong transcription Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs41611	TSPAN12	cis	Artery Tibial	GTEx

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120414800-120421200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:120416400-120417400	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr7:120416400-120417600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr7:120416400-120424800	Weak transcription	H9 Cell Line	embryonic stem cell

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