Variant report

Variant	rs4263616
Chromosome Location	chr6:110369743-110369744
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs2126495	0.87[AFR][1000 genomes]
rs2126496	0.92[AFR][1000 genomes]
rs2126497	0.95[AFR][1000 genomes]
rs2169525	0.95[AFR][1000 genomes]
rs2169526	0.95[AFR][1000 genomes]
rs2361493	0.95[AFR][1000 genomes]
rs55864076	0.87[AFR][1000 genomes]
rs56125429	0.95[AFR][1000 genomes]
rs56818924	0.81[AFR][1000 genomes]
rs57366952	0.95[AFR][1000 genomes]
rs57742381	0.95[AFR][1000 genomes]
rs58305239	0.95[AFR][1000 genomes]
rs58965262	0.95[AFR][1000 genomes]
rs60431992	0.89[AFR][1000 genomes]
rs61133699	0.95[AFR][1000 genomes]
rs61476729	0.95[AFR][1000 genomes]
rs61514346	0.89[AFR][1000 genomes]
rs6907257	0.95[AFR][1000 genomes]
rs6913197	0.92[AFR][1000 genomes]
rs6922544	0.95[AFR][1000 genomes]
rs6928253	0.87[AFR][1000 genomes]
rs6928417	0.93[AFR][1000 genomes]
rs6928628	0.93[AFR][1000 genomes]
rs6928636	0.93[AFR][1000 genomes]
rs73762987	0.89[AFR][1000 genomes]
rs73762989	0.89[AFR][1000 genomes]
rs73762993	0.89[AFR][1000 genomes]
rs73762994	0.95[AFR][1000 genomes]
rs73762995	0.95[AFR][1000 genomes]
rs73762998	0.95[AFR][1000 genomes]
rs73762999	0.95[AFR][1000 genomes]
rs73763000	0.87[AFR][1000 genomes]
rs73763002	0.92[AFR][1000 genomes]
rs73765604	0.92[AFR][1000 genomes]
rs73765606	0.92[AFR][1000 genomes]
rs73765608	0.84[AFR][1000 genomes]
rs73765609	0.92[AFR][1000 genomes]
rs73765610	0.84[AFR][1000 genomes]
rs73765611	0.89[AFR][1000 genomes]
rs73765612	0.92[AFR][1000 genomes]
rs73765613	0.92[AFR][1000 genomes]
rs73765614	0.92[AFR][1000 genomes]
rs73765615	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017642	chr6:110252276-110386453	Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv538417	chr6:110252276-110386453	Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv3475151	chr6:110369588-110371499	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3475153	chr6:110369588-110371499	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:110366000-110370800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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