Variant report

Variant	rs4274739
Chromosome Location	chr3:133786251-133786252
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs13058950	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13062864	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13096547	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34254603	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7621667	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133780000-133789200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:133780600-133789200	Weak transcription	Ovary	ovary
3	chr3:133783800-133787600	Enhancers	Spleen	Spleen
4	chr3:133784000-133787600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr3:133784200-133787000	Enhancers	Fetal Intestine Large	intestine
6	chr3:133784200-133787000	Enhancers	HUVEC	blood vessel
7	chr3:133784200-133787200	Enhancers	Fetal Intestine Small	intestine
8	chr3:133784400-133787000	Enhancers	Right Atrium	heart
9	chr3:133784400-133787200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr3:133784600-133786400	Enhancers	Hela-S3	cervix
11	chr3:133784800-133787800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr3:133785000-133786600	Enhancers	Left Ventricle	heart
13	chr3:133785200-133786400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr3:133785200-133786400	Enhancers	Adipose Nuclei	Adipose
15	chr3:133785200-133786400	Enhancers	Esophagus	oesophagus
16	chr3:133785200-133786400	Enhancers	Stomach Mucosa	stomach
17	chr3:133785200-133786600	Enhancers	Skeletal Muscle Male	skeletal muscle
18	chr3:133785200-133787200	Enhancers	Placenta	Placenta
19	chr3:133785400-133786600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr3:133785400-133787800	Enhancers	Fetal Muscle Trunk	muscle
21	chr3:133785400-133789800	Weak transcription	HSMMtube	muscle
22	chr3:133785600-133786400	Enhancers	Duodenum Mucosa	Duodenum
23	chr3:133785600-133789600	Weak transcription	Fetal Lung	lung
24	chr3:133785600-133789800	Weak transcription	Lung	lung
25	chr3:133785800-133789600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr3:133785800-133790000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr3:133786000-133786600	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr3:133786000-133789800	Weak transcription	Osteobl	bone
29	chr3:133786200-133786400	Enhancers	Right Ventricle	heart
30	chr3:133786200-133786600	Enhancers	NH-A	brain
31	chr3:133786200-133789200	Weak transcription	Fetal Muscle Leg	muscle

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