Variant report

Variant	rs4277695
Chromosome Location	chr3:68462634-68462635
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12637487	0.91[AFR][1000 genomes]
rs13069343	0.80[EUR][1000 genomes]
rs13076798	0.88[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.91[TSI][hapmap]
rs17047647	0.88[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.91[TSI][hapmap]
rs17047650	0.88[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.91[TSI][hapmap]
rs17047665	0.82[AFR][1000 genomes]
rs17047673	1.00[AFR][1000 genomes]
rs17047692	0.80[EUR][1000 genomes]
rs2136716	1.00[LWK][hapmap];0.98[MKK][hapmap];0.82[TSI][hapmap];0.91[AFR][1000 genomes]
rs4634123	0.83[MKK][hapmap]
rs4855482	0.82[MEX][hapmap]
rs73109075	0.91[AFR][1000 genomes]
rs7634101	0.88[MKK][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834721	chr3:68365963-68526394	Weak transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1006007	chr3:68451209-68474361	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
3	nsv1001320	chr3:68451209-68475128	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links