Variant report

Variant	rs4279531
Chromosome Location	chr7:118568441-118568442
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10500069	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1074111	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12668910	0.82[EUR][1000 genomes]
rs12668926	0.82[EUR][1000 genomes]
rs1320849	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17141798	0.82[EUR][1000 genomes]
rs17141814	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1881870	0.90[EUR][1000 genomes]
rs2141558	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2222817	0.85[EUR][1000 genomes]
rs2402424	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2402442	0.88[EUR][1000 genomes]
rs2699765	0.80[EUR][1000 genomes]
rs2699772	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs5027260	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs59756920	0.82[EUR][1000 genomes]
rs60203311	0.82[EUR][1000 genomes]
rs60208831	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60591081	0.85[EUR][1000 genomes]
rs6959236	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6959271	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6959301	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6963484	0.81[CHB][hapmap];0.84[JPT][hapmap]
rs73469804	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73469807	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73469810	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73469815	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73469820	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73471513	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73471514	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73471520	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73488328	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7788712	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs879805	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889093	chr7:117977091-118709754	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv889096	chr7:118438184-118709754	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1021902	chr7:118452600-118719244	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv889097	chr7:118458421-118634585	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv831110	chr7:118543340-118739362	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:118567800-118568800	Enhancers	Fetal Heart	heart

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