Variant report

Variant	rs4366029
Chromosome Location	chr7:137416078-137416079
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10240406	1.00[CEU][hapmap]
rs10257746	1.00[CEU][hapmap]
rs10262883	1.00[CEU][hapmap]
rs10269716	1.00[CEU][hapmap]
rs3778802	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs3778804	1.00[CEU][hapmap]
rs3800638	0.80[EUR][1000 genomes]
rs3800639	1.00[CEU][hapmap]
rs3800640	1.00[CEU][hapmap]
rs3800642	1.00[CEU][hapmap]
rs3800643	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs55953418	0.82[EUR][1000 genomes]
rs57538683	0.82[EUR][1000 genomes]
rs57957290	0.82[EUR][1000 genomes]
rs58701346	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6467715	1.00[CEU][hapmap]
rs73460689	0.82[EUR][1000 genomes]
rs7779850	1.00[CEU][hapmap]
rs7803175	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137403200-137416200	Weak transcription	HSMMtube	muscle
2	chr7:137411000-137424800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr7:137413400-137432200	Weak transcription	Aorta	Aorta
4	chr7:137414200-137419600	Enhancers	Muscle Satellite Cultured Cells	--
5	chr7:137415400-137417200	Enhancers	NHDF-Ad	bronchial
6	chr7:137415400-137417400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr7:137415600-137417400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr7:137415600-137417600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr7:137415800-137416600	Enhancers	NH-A	brain
10	chr7:137415800-137416800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr7:137415800-137416800	Enhancers	Osteobl	bone
12	chr7:137415800-137417400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr7:137416000-137416400	Enhancers	Fetal Heart	heart
14	chr7:137416000-137416600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr7:137416000-137416800	Enhancers	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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