Variant report

Variant	rs4366498
Chromosome Location	chr11:119395257-119395258
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10502231	0.91[ASN][1000 genomes]
rs10790299	1.00[AMR][1000 genomes]
rs10790300	0.81[ASN][1000 genomes]
rs10790301	0.81[ASN][1000 genomes]
rs11825502	0.81[ASN][1000 genomes]
rs12573938	0.91[ASN][1000 genomes]
rs12574200	0.91[ASN][1000 genomes]
rs21727	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs595242	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7110236	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832284	chr11:119237650-119408625	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
2	nsv1054222	chr11:119295063-119406369	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	nsv515	chr11:119358258-119402867	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119377400-119395800	Weak transcription	Spleen	Spleen
2	chr11:119393400-119404000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:119394000-119398200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr11:119394600-119395800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr11:119394600-119397000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr11:119394600-119397400	Enhancers	Brain Hippocampus Middle	brain
7	chr11:119394800-119397000	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr11:119395000-119396000	Enhancers	Primary hematopoietic stem cells	blood
9	chr11:119395000-119396600	Enhancers	Primary B cells from peripheral blood	blood
10	chr11:119395000-119396800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
11	chr11:119395200-119396600	Enhancers	Primary B cells from cord blood	blood
12	chr11:119395200-119396800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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