Variant report

Variant	rs4396124
Chromosome Location	chr1:209367949-209367950
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1933619	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2266024	0.82[EUR][1000 genomes]
rs2489651	0.94[ASN][1000 genomes]
rs2788158	0.89[EUR][1000 genomes]
rs2788159	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2788161	0.94[ASN][1000 genomes]
rs2788162	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2788168	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2788170	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2970555	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2970556	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2970560	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2996683	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2996687	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2996688	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34523921	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34944110	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66763810	0.88[ASN][1000 genomes]
rs71636106	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:209364600-209368200	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr1:209364600-209368400	Weak transcription	Adipose Nuclei	Adipose
3	chr1:209366000-209368200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr1:209366000-209368400	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr1:209366400-209368200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr1:209366400-209368400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr1:209366600-209368200	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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